RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 RPL15P61313 204 aaKnown RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 SLC35B1P78383 322 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 RELBQ01201 579 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 FAM216AQ8WUB2 273 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 C2orf88Q9BSF0 95 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 CLCF1Q9UBD9 225 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 TACC2O95359 2948 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 IGKV1D-17A0A075B6S4 117 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 TMPRSS2O15393 492 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 CA2P00918 260 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 CGAP01215 116 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 MGST1P10620 155 aaKnown RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 IGFBP2P18065 325 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 OR10J1P30954 320 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 VDAC2P45880 294 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 PDLIM4P50479 330 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF134P52741 427 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 MRPS11P82912 194 aaKnown RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 HLA-DRB5Q30154 266 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 ARFGEF3Q5TH69 2177 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 Q8TCH9 128 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 RAB1CQ92928 201 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 SARAFQ96BY9 339 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 OR2V2Q96R30 315 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 DIRC2Q96SL1 478 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 PARD6AQ9NPB6 346 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 TNRC6BQ9UPQ9 1833 aaKnown RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 AKAP13Q12802 2813 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF891A8MT65 544 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 SNURFLB1AK76 121 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 IGKV3-15P01624 115 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 CRYABP02511 175 aaKnown RBP7.86□□□□□ -1.15
SYNE2-213ENST00000554805 TIMP3P35625 211 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 FOXL1Q12952 345 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 EFNB3Q15768 340 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 FDCSPQ8NFU4 85 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 HSPB9Q9BQS6 159 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 M0R143 59 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 MIR17HGQ75NE6 70 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 BHLHA15Q7RTS1 189 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-213ENST00000554805 OR8I2Q8N0Y5 310 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 TXNDC17Q9BRA2 123 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 IGHV1-18A0A0C4DH31 117 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 GATA2P23769 480 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-213ENST00000554805 CRYBB3P26998 211 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 GNG4P50150 75 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 HSPE1P61604 102 aaKnown RBP7.85□□□□□ -1.15
SYNE2-213ENST00000554805 RPEL1Q2QD12 228 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 KIAA1644Q3SXP7 199 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 Q8N7P7 452 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 ITLN1Q8WWA0 313 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 PAM16Q9Y3D7 125 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 PIEZO1Q92508 2521 aa7.85□□□□□ -1.15
SYNE2-213ENST00000554805 YPEL1O60688 119 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 KIR2DS2P43631 304 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 RPL19P84098 196 aaKnown RBP7.84□□□□□ -1.15
SYNE2-213ENST00000554805 ARSJQ5FYB0 599 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-213ENST00000554805 UTF1Q5T230 341 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 OR4A47Q6IF82 309 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 TMEM144Q7Z5S9 345 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 VN1R17PQ8TDU5 208 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 YPEL2Q96QA6 119 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 IL36BQ9NZH7 164 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 NAT8BQ9UHF3 227 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 POLR3KQ9Y2Y1 108 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-213ENST00000554805 OR51B2Q9Y5P1 312 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 HELTA6NFD8 242 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 SERF1AO75920 110 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 OR10J4P0C629 311 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 RAB7AP51149 207 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 KRTDAPP60985 99 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 FXYD3Q14802 87 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 TIGITQ495A1 244 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 PQLC2Q6ZP29 291 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 BEND2Q8NDZ0 799 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 IFI27L2Q9H2X8 130 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 INTS1Q8N201 2190 aaKnown RBP7.84□□□□□ -1.15
SYNE2-213ENST00000554805 TRGV10A0A0A0MS01 117 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 SRRM5B3KS81 715 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 J3QR06 171 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 SPRNQ5BIV9 151 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 DOLPP1Q86YN1 238 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 MMD2Q8IY49 270 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 GCSAMQ8N6F7 178 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 OR52E5Q8NH55 327 aa7.84□□□□□ -1.15
SYNE2-213ENST00000554805 ZZEF1O43149 2961 aa7.84□□□□□ -1.16
SYNE2-213ENST00000554805 TNCP24821 2201 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 PRR33A8MZF0 331 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 CT45A1Q5HYN5 189 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 MOB3BQ86TA1 216 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 CT45A3Q8NHU0 189 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 ZCCHC14Q8WYQ9 949 aaKnown RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SNHG12Q9BXW3 62 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 TLN1Q9Y490 2541 aaKnown RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SAA2-SAA4A0A096LPE2 208 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 TRAV17A0A0B4J275 112 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 C15orf61A6NNL5 157 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SAA2P0DJI9 122 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 KLF3P57682 345 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms