RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 KLK15Q9H2R5 256 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 SLC2A9Q9NRM0 540 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 MCUBQ9NWR8 336 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 TEX13DA0A0J9YY54 714 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 FAM223BA6NKX1 122 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 G3V4G9 280 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 UPK2O00526 184 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 KRASP01116 189 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 IGHV3-11P01762 117 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 CTSDP07339 412 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 IGLL1P15814 213 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 HIST1H1BP16401 226 aaKnown RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 ZP3P21754 424 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 AKR1C2P52895 323 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 PIGPP57054 158 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 RND3P61587 244 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 RUNX1Q01196 453 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 ATP5G2Q06055 141 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 TRIM16LQ309B1 348 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 DEFB136Q30KP8 78 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 C1QL4Q86Z23 238 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 FAM223AQ8IWN6 122 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 Q8N402 240 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 OR4A16Q8NH70 328 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 RRNAD1Q96FB5 475 aaKnown RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 DUX3Q96PT4 197 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 P2RX4Q99571 388 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 PDCD10Q9BUL8 212 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 HINT2Q9BX68 163 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 RBM38Q9H0Z9 239 aaKnown RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 GNB4Q9HAV0 340 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 RANGRFQ9HD47 186 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-209ENST00000553855 THYN1Q9P016 225 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 PRNDQ9UKY0 176 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 ZNF257Q9Y2Q1 563 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 KCNIP3Q9Y2W7 256 aa6.48□□□□□ -1.37
PSEN1-209ENST00000553855 A0A087WWL8 130 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 C3orf85A0A1B0GTC6 90 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 ANKRD20A5PA0PJZ0 165 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 H0Y980 276 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 I3L521 148 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 SOX15O60248 233 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 BRI3O95415 125 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
PSEN1-209ENST00000553855 FGF2P09038 288 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 TRAPPC2P0DI81 140 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 TRAPPC2BP0DI82 140 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 ANXA3P12429 323 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 PI3P19957 117 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 G6PCP35575 357 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 POU2AF1Q16633 256 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 C9orf66Q5T8R8 295 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 TRIQKQ629K1 86 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 ZNF57Q68EA5 555 aaPredicted RBP6.47□□□□□ -1.37
PSEN1-209ENST00000553855 LHFPL1Q86WI0 220 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 TTC9CQ8N5M4 171 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 OR4C16Q8NGL9 310 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 OR1L8Q8NGR8 309 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 OR13C8Q8NGS7 320 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 MARCH1Q8TCQ1 289 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 MYOZ3Q8TDC0 251 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 CASTOR1Q8WTX7 329 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 DEDD2Q8WXF8 326 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 SRSF8Q9BRL6 282 aaKnown RBP6.47□□□□□ -1.37
PSEN1-209ENST00000553855 ELOVL1Q9BW60 279 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
PSEN1-209ENST00000553855 OR51B2Q9Y5P1 312 aa6.47□□□□□ -1.37
PSEN1-209ENST00000553855 HMX3A6NHT5 357 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF785A8K8V0 405 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 NPIPB5A8MRT5 1133 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 CENPXA8MT69 81 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 SEC14L6B5MCN3 397 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 OVOL1O14753 267 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF735P0CB33 412 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 INSL3P51460 131 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 BRWD1-AS2P59051 145 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 RHOGP84095 191 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 DHODHQ02127 395 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 C10orf55Q5SWW7 151 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 FAAP20Q6NZ36 180 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 CADM3Q8N126 398 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 NECAP1Q8NC96 275 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 ADAD2Q8NCV1 583 aaKnown RBP6.46□□□□□ -1.38
PSEN1-209ENST00000553855 OR4D10Q8NGI6 311 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 OR51S1Q8NGJ8 323 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 OR1L6Q8NGR2 347 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 OR5B3Q8NH48 314 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 LSM10Q969L4 123 aaKnown RBP6.46□□□□□ -1.38
PSEN1-209ENST00000553855 ENY2Q9NPA8 101 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 FAM30AQ9NZY2 134 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 PEF1Q9UBV8 284 aaKnown RBP6.46□□□□□ -1.38
PSEN1-209ENST00000553855 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
PSEN1-209ENST00000553855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms