RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 RNASE11Q8TAA1 199 aaKnown RBP17.64■□□□□ 0.41
TDP1-206ENST00000553569 DEDD2Q8WXF8 326 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 TMEM230Q96A57 120 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 AKIP1Q9NQ31 210 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 NOTCH3Q9UM47 2321 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 IGLC7A0M8Q6 106 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 ANKRD34BA5PLL1 514 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 DBX1A6NMT0 343 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 LINC01619G3V211 115 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 OR2J3O76001 311 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 AKR1C4P17516 323 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 TMED4Q7Z7H5 227 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 SGPP2Q8IWX5 399 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 USMG5Q96IX5 58 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 TMEM222Q9H0R3 208 aa17.63■□□□□ 0.41
TDP1-206ENST00000553569 FAM223BA6NKX1 122 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 ATG12O94817 140 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 CRYGCP07315 174 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 DEFA4P12838 97 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 IL7P13232 177 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 CTRB1P17538 263 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 SLURP1P55000 103 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 CTRB2Q6GPI1 263 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 THOC7Q6I9Y2 204 aaKnown RBP17.62■□□□□ 0.41
TDP1-206ENST00000553569 FAM223AQ8IWN6 122 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 SRSF8Q9BRL6 282 aaKnown RBP17.62■□□□□ 0.41
TDP1-206ENST00000553569 TMEM14BQ9NUH8 114 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 FKBP11Q9NYL4 201 aa17.62■□□□□ 0.41
TDP1-206ENST00000553569 TRBV9A0A0B4J1U6 114 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 DHFRP00374 187 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 HSPB1P04792 205 aaKnown RBP17.61■□□□□ 0.41
TDP1-206ENST00000553569 MECP2P51608 486 aaKnown RBP17.61■□□□□ 0.41
TDP1-206ENST00000553569 DEFA6Q01524 100 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 DHODHQ02127 395 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 EXOSC2Q13868 293 aaKnown RBP17.61■□□□□ 0.41
TDP1-206ENST00000553569 BEAN1Q3B7T3 259 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 OR5B3Q8NH48 314 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 LHFPL5Q8TAF8 219 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 GLYATL2Q8WU03 294 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 NDUFA4L2Q9NRX3 87 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 PRR13Q9NZ81 148 aa17.61■□□□□ 0.41
TDP1-206ENST00000553569 DUS4LO95620 317 aaKnown RBP17.6■□□□□ 0.41
TDP1-206ENST00000553569 OR13C7P0DN81 318 aa17.6■□□□□ 0.41
TDP1-206ENST00000553569 CCR6P51684 374 aa17.6■□□□□ 0.41
TDP1-206ENST00000553569 ATP5G2Q06055 141 aa17.6■□□□□ 0.41
TDP1-206ENST00000553569 NECAP1Q8NC96 275 aa17.6■□□□□ 0.41
TDP1-206ENST00000553569 LSM10Q969L4 123 aaKnown RBP17.6■□□□□ 0.41
TDP1-206ENST00000553569 RRNAD1Q96FB5 475 aaKnown RBP17.6■□□□□ 0.41
TDP1-206ENST00000553569 BATF3Q9NR55 127 aa17.6■□□□□ 0.41
TDP1-206ENST00000553569 FBXL7Q9UJT9 491 aa17.6■□□□□ 0.41
TDP1-206ENST00000553569 A0A0G2JRQ6 117 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 CDS2O95674 445 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 P0C879 139 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 WT1-ASQ06250 92 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 C15orf32Q32M92 178 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 TMEM268Q5VZI3 342 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 ZNF343Q6P1L6 599 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 SELENOHQ8IZQ5 122 aaKnown RBP17.59■□□□□ 0.41
TDP1-206ENST00000553569 DCUN1D4Q92564 292 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 RBPMSQ93062 196 aaKnown RBP17.59■□□□□ 0.41
TDP1-206ENST00000553569 FANCD2OSQ96PS1 177 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 SLC25A21Q9BQT8 299 aaPredicted RBP17.59■□□□□ 0.41
TDP1-206ENST00000553569 MCRIP2Q9BUT9 160 aaKnown RBP17.59■□□□□ 0.41
TDP1-206ENST00000553569 PTTG2Q9NZH5 202 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 KCNIP3Q9Y2W7 256 aa17.59■□□□□ 0.41
TDP1-206ENST00000553569 NAP1L6A6NFF2 107 aa17.58■□□□□ 0.4
TDP1-206ENST00000553569 TRBV12-3P01733 135 aa17.58■□□□□ 0.4
TDP1-206ENST00000553569 RBMS2Q15434 407 aaKnown RBP17.58■□□□□ 0.4
TDP1-206ENST00000553569 HSD17B13Q7Z5P4 300 aaPredicted RBP17.58■□□□□ 0.4
TDP1-206ENST00000553569 GALNT14Q96FL9 552 aa17.58■□□□□ 0.4
TDP1-206ENST00000553569 TMEM56Q96MV1 263 aa17.58■□□□□ 0.4
TDP1-206ENST00000553569 RANGRFQ9HD47 186 aaPredicted RBP17.58■□□□□ 0.4
TDP1-206ENST00000553569 NOTCH1P46531 2555 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 IGLV11-55A0A075B6I3 123 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 NDUFB8O95169 186 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 HIST1H1BP16401 226 aaKnown RBP17.57■□□□□ 0.4
TDP1-206ENST00000553569 SUPT4H1P63272 117 aaKnown RBP17.57■□□□□ 0.4
TDP1-206ENST00000553569 TMEM187Q14656 261 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 SPINK9Q5DT21 86 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 DLX4Q92988 240 aaPredicted RBP17.57■□□□□ 0.4
TDP1-206ENST00000553569 GPR61Q9BZJ8 451 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 PEF1Q9UBV8 284 aaKnown RBP17.57■□□□□ 0.4
TDP1-206ENST00000553569 S4R3C0 116 aa17.57■□□□□ 0.4
TDP1-206ENST00000553569 A0A0B4J293 547 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 CENPXA8MT69 81 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 SEC14L6B5MCN3 397 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 OVOL1O14753 267 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 IGHV3-23P01764 117 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 PRB2P02812 416 aaPredicted RBP17.56■□□□□ 0.4
TDP1-206ENST00000553569 HOXD3P31249 432 aaPredicted RBP17.56■□□□□ 0.4
TDP1-206ENST00000553569 PRCDQ00LT1 54 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 KPRPQ5T749 579 aaPredicted RBP17.56■□□□□ 0.4
TDP1-206ENST00000553569 TMEM56-RWDD3S4R434 201 aa17.56■□□□□ 0.4
TDP1-206ENST00000553569 ST8SIA3O43173 380 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 ANXA3P12429 323 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 VAMP1P23763 118 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 HSPE1P61604 102 aaKnown RBP17.55■□□□□ 0.4
TDP1-206ENST00000553569 LINC00299Q6ZSB3 139 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 CENPSQ8N2Z9 138 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 S100ZQ8WXG8 99 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms