RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TRAPPC2BP0DI82 140 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 ZP3P21754 424 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 EXOSC2Q13868 293 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 HSD17B13Q7Z5P4 300 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 NECAP1Q8NC96 275 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 DEDD2Q8WXF8 326 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 SEC22AQ96IW7 307 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 C5orf66Q9H5L9 145 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 NAA60Q9H7X0 242 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 AKIP1Q9NQ31 210 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 GPR132Q9UNW8 380 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 C15orf61A6NNL5 157 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 SEC14L6B5MCN3 397 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 OVOL1O14753 267 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 IGKV1-39P01597 117 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 IGKV1D-39P04432 117 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 REG1AP05451 166 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 HIST1H1BP16401 226 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 MECP2P51608 486 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 SLURP1P55000 103 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 ZNF45Q02386 682 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 SP6Q3SY56 376 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 C9orf66Q5T8R8 295 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 SGPP2Q8IWX5 399 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 GDPD1Q8N9F7 314 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 OR5B3Q8NH48 314 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 LSM10Q969L4 123 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 RRNAD1Q96FB5 475 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 TMEM56Q96MV1 263 aa14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 RTBDNQ9BSG5 229 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-216ENST00000552301 TRBV9A0A0B4J1U6 114 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 TEX50A0A1B0GTY4 177 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 IGLC7A0M8Q6 106 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 CRYGCP07315 174 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 OR5AC1P0C628 307 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 CTRB1P17538 263 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 UCP1P25874 307 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 C15orf32Q32M92 178 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 FAM209BQ5JX69 171 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 CTRB2Q6GPI1 263 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 ZNF343Q6P1L6 599 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 DCUN1D4Q92564 292 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 PEF1Q9UBV8 284 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 FBXL7Q9UJT9 491 aa14.26□□□□□ -0.13
PRPF40B-216ENST00000552301 CRYM-AS1A6NIL9 109 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 CGB1A6NKQ9 187 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 HOXD3P31249 432 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 DHODHQ02127 395 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 C19orf35Q6ZS72 473 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 REC114Q7Z4M0 266 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 OR10W1Q8NGF6 305 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 TMEM222Q9H0R3 208 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 NDUFA4L2Q9NRX3 87 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 TMEM14BQ9NUH8 114 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 ZMAT5Q9UDW3 170 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 KCNIP3Q9Y2W7 256 aa14.25□□□□□ -0.13
PRPF40B-216ENST00000552301 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-216ENST00000552301 PDCD10Q9BUL8 212 aa14.24□□□□□ -0.13
PRPF40B-216ENST00000552301 THYN1Q9P016 225 aa14.24□□□□□ -0.13
PRPF40B-216ENST00000552301 IGKV1-5P01602 117 aa14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 PRB2P02812 416 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 ANXA3P12429 323 aa14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 AKR1C4P17516 323 aa14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 RPEL1Q2QD12 228 aa14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 RBPMSQ93062 196 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 EEF1AKMT3Q96AZ1 226 aa14.23□□□□□ -0.13
PRPF40B-216ENST00000552301 IGLV11-55A0A075B6I3 123 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 DBX1A6NMT0 343 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 WT1-ASQ06250 92 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 TMED4Q7Z7H5 227 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 FAM219AQ8IW50 185 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 GLYATL2Q8WU03 294 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 FANCD2OSQ96PS1 177 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 SLC25A21Q9BQT8 299 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 ELOVL1Q9BW60 279 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
PRPF40B-216ENST00000552301 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 NAP1L6A6NFF2 107 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 SAP30O75446 220 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 NDUFB8O95169 186 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 CDS2O95674 445 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 TRBV12-3P01733 135 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 INSL3P51460 131 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 HSPE1P61604 102 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 PRCDQ00LT1 54 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 BAK1Q16611 211 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 TATDN3Q17R31 274 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 IZUMO4Q1ZYL8 232 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 PDLIM3Q53GG5 364 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 TMEM268Q5VZI3 342 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 SLC25A24Q6NUK1 477 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 SLC35G3Q8N808 338 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 CXorf58Q96LI9 332 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 OR4C12Q96R67 309 aa14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 AURKAIP1Q9NWT8 199 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-216ENST00000552301 LINC00854A0A1B0GVQ3 168 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 CENPXA8MT69 81 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 IFNA17P01571 189 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 SRPXP78539 464 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms