RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 CRYZL1O95825 349 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 C1QAP02745 245 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 RPSAP08865 295 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 TRGC1P0CF51 173 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 SULT1A3P0DMM9 295 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 SULT1A4P0DMN0 295 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 MARCKSL1P49006 195 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 SPCS3P61009 180 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 RPS24P62847 133 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 MRPS25P82663 173 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 EMX1Q04741 257 aaPredicted RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 JOSD1Q15040 202 aaPredicted RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 MOGQ16653 247 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 LRRC26Q2I0M4 334 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 SPANXN5Q5MJ07 72 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 C1orf195Q5TG92 126 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 RPL22L1Q6P5R6 122 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 SBSNQ6UWP8 590 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 TRAPPC6BQ86SZ2 158 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 C20orf196Q8IYI0 205 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 C10orf67Q8IYJ2 551 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 GNPNAT1Q96EK6 184 aaPredicted RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 CNBD2Q96M20 576 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 TRIM4Q9C037 500 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 CXorf21Q9HAI6 301 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 PARVGQ9HBI0 331 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 HRASLSQ9HDD0 168 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 XPNPEP1Q9NQW7 623 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 NHP2Q9NX24 153 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 EURLQ9NYK6 297 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 CKLFQ9UBR5 152 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 NAT8Q9UHE5 227 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 GUCA1BQ9UMX6 200 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 RBM7Q9Y580 266 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 PXMP4Q9Y6I8 212 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 MYOFQ9NZM1 2061 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 CCDC88AQ3V6T2 1871 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 MYH10P35580 1976 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 NUMA1Q14980 2115 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 ANAPC1Q9H1A4 1944 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 TRBV20OR9-2A0A075B6H5 130 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 TRAV14DV4A0A0A6YYC5 116 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 A0A0D9SG52 128 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 GGT3PA6NGU5 568 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 FABP5P3A8MUU1 101 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 C9JCJ5 164 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CLDN25C9JDP6 229 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 F5H768 121 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 H7C2G1 150 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 I3L521 148 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 COX7A2LO14548 114 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 COCHO43405 550 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 PROSCO94903 275 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 OR5F1O95221 314 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 TCL1BO95988 128 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 HTR1AP08908 422 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 SRP19P09132 144 aaKnown RBP0.68□□□□□ -2.3
USP44-207ENST00000552237 COX5BP10606 129 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CXCL2P19875 107 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CXCL3P19876 107 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 FXYD2P54710 66 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 TCL1AP56279 114 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 RHOBP62745 196 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CTAG1AP78358 180 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 MLLT11Q13015 90 aaPredicted RBP0.68□□□□□ -2.3
USP44-207ENST00000552237 TMED2Q15363 201 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 C4orf26Q17RF5 130 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 RALGAPA2Q2PPJ7 1873 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 LRRC75BQ2VPJ9 315 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 ACSM3Q53FZ2 586 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 SPANXN3Q5MJ09 141 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 LYRM7Q5U5X0 104 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CD200R1LQ6Q8B3 271 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CROCCP2Q86T23 111 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 TRAPPC5Q8IUR0 188 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 IFT20Q8IY31 132 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 LRRC25Q8N386 305 aaPredicted RBP0.68□□□□□ -2.3
USP44-207ENST00000552237 RPP25LQ8N5L8 163 aaKnown RBP0.68□□□□□ -2.3
USP44-207ENST00000552237 C15orf53Q8NAA6 179 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 ZNF439Q8NDP4 499 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 EEF1AKMT1Q8WVE0 214 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 C4orf3Q8WVX3 66 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 DNAJC9Q8WXX5 260 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 C11orf40Q8WZ69 217 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 ANKRD7Q92527 254 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 ITFG2Q969R8 447 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 TMEM106AQ96A25 262 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 BORCS7Q96B45 105 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CCDC42Q96M95 316 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 SCGB3A1Q96QR1 104 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 KIFC1Q9BW19 673 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 YIPF3Q9GZM5 350 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 SLC39A9Q9NUM3 307 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 FUT9Q9Y231 359 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 RTL1A6NKG5 1358 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 FLT4P35916 1363 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 MAP3K5Q99683 1374 aa0.68□□□□□ -2.3
USP44-207ENST00000552237 CPAMD8Q8IZJ3 1885 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 ECM29Q5VYK3 1845 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms