RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 GPHB5Q86YW7 130 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 BORCS5Q969J3 196 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 SEC22AQ96IW7 307 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 AIFM2Q9BRQ8 373 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 COMMD5Q9GZQ3 224 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 WFDC10AQ9H1F0 79 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 ZC4H2Q9NQZ6 224 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 PEMTQ9UBM1 199 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 SACSQ9NZJ4 4579 aa9.82□□□□□ -0.84
NPAS3-209ENST00000551008 CD7P09564 240 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 HIST1H1BP16401 226 aaKnown RBP9.81□□□□□ -0.84
NPAS3-209ENST00000551008 ZNF182P17025 639 aaPredicted RBP9.81□□□□□ -0.84
NPAS3-209ENST00000551008 ARL3P36405 182 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 UCP3P55916 312 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 TATDN3Q17R31 274 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 FAM209BQ5JX69 171 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 TBC1D26Q86UD7 250 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 GDPD1Q8N9F7 314 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 OR4D10Q8NGI6 311 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 OR2K2Q8NGT1 345 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 MRGPRFQ96AM1 343 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 MRPS26Q9BYN8 205 aaKnown RBP9.81□□□□□ -0.84
NPAS3-209ENST00000551008 TMEM14BQ9NUH8 114 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 EXTL2Q9UBQ6 330 aa9.81□□□□□ -0.84
NPAS3-209ENST00000551008 C15orf61A6NNL5 157 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 CD3DP04234 171 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 SERPINE2P07093 398 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 TRAPPC2P0DI81 140 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 TRAPPC2BP0DI82 140 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.84
NPAS3-209ENST00000551008 GPR183P32249 361 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 ERVK-16P61578 105 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 PRR20EP86478 221 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 PRR20CP86479 221 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 PRR20DP86480 221 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 PRR20BP86481 221 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 PRR20AP86496 221 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 HAGHQ16775 308 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 LAX1Q8IWV1 398 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 CMTM1Q8IZ96 169 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 OR1L8Q8NGR8 309 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 WDR89Q96FK6 387 aaPredicted RBP9.8□□□□□ -0.84
NPAS3-209ENST00000551008 FAM212BQ9NTI7 297 aaPredicted RBP9.8□□□□□ -0.84
NPAS3-209ENST00000551008 MTFP1Q9UDX5 166 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 MLXQ9UH92 298 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 F11RQ9Y624 299 aaKnown RBP9.8□□□□□ -0.84
NPAS3-209ENST00000551008 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
NPAS3-209ENST00000551008 TRBV7-1A0A0A6YYK4 115 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 IGHV3-35A0A0C4DH35 117 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 SMIM31A0A1B0GVY4 71 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 FAM25AB3EWG3 89 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 FAM25CB3EWG5 89 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 FAM25GB3EWG6 89 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 K7EIM0 57 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 CTDSP2O14595 271 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 DHFRP00374 187 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 CLEC3BP05452 202 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 P0C879 139 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 DEFA4P12838 97 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 PI3P19957 117 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 CBLN1P23435 193 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 TSPAN5P62079 268 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 TM4SF20Q53R12 229 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 THOC7Q6I9Y2 204 aaKnown RBP9.79□□□□□ -0.84
NPAS3-209ENST00000551008 MZT2AQ6P582 158 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 SGPP2Q8IWX5 399 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 TMEM61Q8N0U2 210 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 PLEKHA3Q9HB20 300 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 OR51B2Q9Y5P1 312 aa9.79□□□□□ -0.84
NPAS3-209ENST00000551008 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
NPAS3-209ENST00000551008 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
NPAS3-209ENST00000551008 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 CD74P04233 296 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
NPAS3-209ENST00000551008 C8orf88P0DMB2 117 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 ADMP35318 185 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 RND3P61587 244 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 SLC38A6Q8IZM9 456 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 VN1R17PQ8TDU5 208 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 LSM10Q969L4 123 aaKnown RBP9.78□□□□□ -0.84
NPAS3-209ENST00000551008 CXorf58Q96LI9 332 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 NEURL2Q9BR09 285 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 HINT2Q9BX68 163 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 ZNF436Q9C0F3 470 aaPredicted RBP9.78□□□□□ -0.84
NPAS3-209ENST00000551008 EDA2RQ9HAV5 297 aa9.78□□□□□ -0.84
NPAS3-209ENST00000551008 TGOLN2O43493 480 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 TPPPO94811 219 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 CD81P60033 236 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 RNASE10Q5GAN6 216 aaKnown RBP9.77□□□□□ -0.85
NPAS3-209ENST00000551008 GPR141Q7Z602 305 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 GTSCR1Q86UQ5 136 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 DEFB125Q8N687 156 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 UXS1Q8NBZ7 420 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 OR5B3Q8NH48 314 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms