RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PRR13Q9NZ81 148 aa10.63□□□□□ -0.71
TROAP-213ENST00000550709 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
TROAP-213ENST00000550709 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 IGLC7A0M8Q6 106 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 NPIPB5A8MRT5 1133 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 B3GALNT1O75752 331 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 ATG12O94817 140 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 OR13C7P0DN81 318 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 IL7P13232 177 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 MECP2P51608 486 aaKnown RBP10.62□□□□□ -0.71
TROAP-213ENST00000550709 CCR6P51684 374 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 CADM3Q8N126 398 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 GLYATL2Q8WU03 294 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 RRNAD1Q96FB5 475 aaKnown RBP10.62□□□□□ -0.71
TROAP-213ENST00000550709 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 BATF3Q9NR55 127 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 TMEM14BQ9NUH8 114 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
TROAP-213ENST00000550709 TRBV9A0A0B4J1U6 114 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 LINC01619G3V211 115 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 BRI3O95415 125 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
TROAP-213ENST00000550709 CRYGCP07315 174 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 FGF2P09038 288 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 OR8U8P0C7N1 319 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 CTRB1P17538 263 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 SLURP1P55000 103 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 DEFA6Q01524 100 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 DHODHQ02127 395 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 FHL3Q13643 280 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 SPINK9Q5DT21 86 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 SAMD5Q5TGI4 173 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 CTRB2Q6GPI1 263 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 LHFPL5Q8TAF8 219 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 DEDD2Q8WXF8 326 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
TROAP-213ENST00000550709 NDUFA4L2Q9NRX3 87 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 KCNIP3Q9Y2W7 256 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 S4R3C0 116 aa10.61□□□□□ -0.71
TROAP-213ENST00000550709 A0A0B4J293 547 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 NDUFB8O95169 186 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 CDS2O95674 445 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 DHFRP00374 187 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 IGHV3-23P01764 117 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 WT1-ASQ06250 92 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 EXOSC2Q13868 293 aaKnown RBP10.6□□□□□ -0.71
TROAP-213ENST00000550709 TMEM187Q14656 261 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 FAM223AQ8IWN6 122 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 SELENOHQ8IZQ5 122 aaKnown RBP10.6□□□□□ -0.71
TROAP-213ENST00000550709 NECAP1Q8NC96 275 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 OR5B3Q8NH48 314 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 DCUN1D4Q92564 292 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
TROAP-213ENST00000550709 FANCD2OSQ96PS1 177 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 SLC25A21Q9BQT8 299 aaPredicted RBP10.6□□□□□ -0.71
TROAP-213ENST00000550709 SRSF8Q9BRL6 282 aaKnown RBP10.6□□□□□ -0.71
TROAP-213ENST00000550709 PTTG2Q9NZH5 202 aa10.6□□□□□ -0.71
TROAP-213ENST00000550709 NAP1L6A6NFF2 107 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 CENPXA8MT69 81 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 IFNA17P01571 189 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 PRB2P02812 416 aaPredicted RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 P0C879 139 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 VAMP1P23763 118 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 HSPE1P61604 102 aaKnown RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 RBMS2Q15434 407 aaKnown RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 ZNF343Q6P1L6 599 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 DLX4Q92988 240 aaPredicted RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 LSM10Q969L4 123 aaKnown RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 GALNT14Q96FL9 552 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 TMEM56Q96MV1 263 aa10.59□□□□□ -0.71
TROAP-213ENST00000550709 RANGRFQ9HD47 186 aaPredicted RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 PEF1Q9UBV8 284 aaKnown RBP10.59□□□□□ -0.71
TROAP-213ENST00000550709 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 ST8SIA3O43173 380 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 ANXA3P12429 323 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 HIST1H1BP16401 226 aaKnown RBP10.58□□□□□ -0.72
TROAP-213ENST00000550709 HOXD3P31249 432 aaPredicted RBP10.58□□□□□ -0.72
TROAP-213ENST00000550709 THOC7Q6I9Y2 204 aaKnown RBP10.58□□□□□ -0.72
TROAP-213ENST00000550709 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 Q6ZRM9 215 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 HSD17B13Q7Z5P4 300 aaPredicted RBP10.58□□□□□ -0.72
TROAP-213ENST00000550709 S100ZQ8WXG8 99 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 GPR146Q96CH1 333 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 MCRIP2Q9BUT9 160 aaKnown RBP10.58□□□□□ -0.72
TROAP-213ENST00000550709 FLVCR2Q9UPI3 526 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 TMEM56-RWDD3S4R434 201 aa10.58□□□□□ -0.72
TROAP-213ENST00000550709 IGLV11-55A0A075B6I3 123 aa10.57□□□□□ -0.72
TROAP-213ENST00000550709 OVOL1O14753 267 aa10.57□□□□□ -0.72
TROAP-213ENST00000550709 PLA2G10O15496 165 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms