RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 DEFA4P12838 97 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 VAMP1P23763 118 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 MECP2P51608 486 aaKnown RBP7.47□□□□□ -1.21
RAB5B-205ENST00000549034 SUPT4H1P63272 117 aaKnown RBP7.47□□□□□ -1.21
RAB5B-205ENST00000549034 TMEM268Q5VZI3 342 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 MZT2BQ6NZ67 158 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 LGI3Q8N145 548 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 OR10W1Q8NGF6 305 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 LHFPL5Q8TAF8 219 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 RBPMSQ93062 196 aaKnown RBP7.47□□□□□ -1.21
RAB5B-205ENST00000549034 GPR146Q96CH1 333 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 GALNT14Q96FL9 552 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 TMEM56Q96MV1 263 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 QTRT1Q9BXR0 403 aaKnown RBP7.47□□□□□ -1.21
RAB5B-205ENST00000549034 SLA2Q9H6Q3 261 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 GNB4Q9HAV0 340 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 TMEM56-RWDD3S4R434 201 aa7.47□□□□□ -1.21
RAB5B-205ENST00000549034 A0A0B4J293 547 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 A0A0G2JLM5 398 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 A0A0G2JRQ6 117 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 DBX1A6NMT0 343 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 H3BUA1 57 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 CCL24O00175 119 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 UPK1BO75841 260 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 IFNA17P01571 189 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 TCRBP04435 133 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 OR13C7P0DN81 318 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 AREGP15514 252 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 PSMB6P28072 239 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 BTCP35070 178 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 MYCNOSP40205 109 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 RAB25P57735 213 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 HSPE1P61604 102 aaKnown RBP7.46□□□□□ -1.22
RAB5B-205ENST00000549034 ATP5G2Q06055 141 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 PPP1R1AQ13522 171 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 OR1N2Q8NGR9 330 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 OR5B3Q8NH48 314 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 DPF1Q92782 380 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 PDCD10Q9BUL8 212 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 NDUFA4L2Q9NRX3 87 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.22
RAB5B-205ENST00000549034 TMEM14BQ9NUH8 114 aa7.46□□□□□ -1.22
RAB5B-205ENST00000549034 WNK1Q9H4A3 2382 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 FAM240BA0A1B0GVZ2 78 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 C9orf170A2RU37 121 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 ANKRD34BA5PLL1 514 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 C15orf61A6NNL5 157 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 NPIPB5A8MRT5 1133 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 OR2J3O76001 311 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 DHFRP00374 187 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 CRYGCP07315 174 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 FGF2P09038 288 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 CTRB1P17538 263 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 ANXA7P20073 488 aaKnown RBP7.45□□□□□ -1.22
RAB5B-205ENST00000549034 SLC6A1P30531 599 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 SRPXP78539 464 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 DEFA5Q01523 94 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 IFITM3Q01628 133 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 C4orf46Q504U0 113 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 SPINK9Q5DT21 86 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 CTRB2Q6GPI1 263 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 SLC25A24Q6NUK1 477 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 Q6ZRM9 215 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 C19orf35Q6ZS72 473 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 LYZL2Q7Z4W2 148 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 SLC35G3Q8N808 338 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 OR11H1Q8NG94 326 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 MYOZ3Q8TDC0 251 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 C4orf3Q8WVX3 66 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 IL22RA2Q969J5 263 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 LSM10Q969L4 123 aaKnown RBP7.45□□□□□ -1.22
RAB5B-205ENST00000549034 RAX2Q96IS3 184 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 SRSF8Q9BRL6 282 aaKnown RBP7.45□□□□□ -1.22
RAB5B-205ENST00000549034 ALX4Q9H161 411 aaPredicted RBP7.45□□□□□ -1.22
RAB5B-205ENST00000549034 FBXL7Q9UJT9 491 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 ZNF257Q9Y2Q1 563 aa7.45□□□□□ -1.22
RAB5B-205ENST00000549034 TENM1Q9UKZ4 2725 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 TRAV6A0A075B6T7 132 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 IGLC7A0M8Q6 106 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 I3L521 148 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 ST8SIA3O43173 380 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 BRI3O95415 125 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 LGALS1P09382 135 aaKnown RBP7.44□□□□□ -1.22
RAB5B-205ENST00000549034 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 OR4E1P0C645 316 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 P0C879 139 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 HIST1H1BP16401 226 aaKnown RBP7.44□□□□□ -1.22
RAB5B-205ENST00000549034 CD33P20138 364 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 UBE2MP61081 183 aaKnown RBP7.44□□□□□ -1.22
RAB5B-205ENST00000549034 ERHP84090 104 aaKnown RBP7.44□□□□□ -1.22
RAB5B-205ENST00000549034 RHOGP84095 191 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 WT1-ASQ06250 92 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 ASAH1Q13510 395 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 ANKRD55Q3KP44 614 aa7.44□□□□□ -1.22
RAB5B-205ENST00000549034 THOC7Q6I9Y2 204 aaKnown RBP7.44□□□□□ -1.22
RAB5B-205ENST00000549034 HSD17B13Q7Z5P4 300 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms