RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 C14orf166Q9Y224 244 aaKnown RBP10.2□□□□□ -0.78
CDX2-202ENST00000548877 NUPR2A6NF83 97 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 NAPSAO96009 420 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 CD7P09564 240 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 RAP2BP61225 183 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 DHRS2Q13268 280 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 FXYD3Q14802 87 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 RPL39P5Q59GN2 51 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 DHRS11Q6UWP2 260 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 LYG2Q86SG7 212 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 DEFB125Q8N687 156 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 OR11H7Q8NGC8 314 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 FYTTD1Q96QD9 318 aaKnown RBP10.19□□□□□ -0.78
CDX2-202ENST00000548877 CLCC1Q96S66 551 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 TSNAXQ99598 290 aaKnown RBP10.19□□□□□ -0.78
CDX2-202ENST00000548877 ZC4H2Q9NQZ6 224 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 ZNF355PQ9NSJ1 428 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 MGAT4CQ9UBM8 478 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 GPR132Q9UNW8 380 aa10.19□□□□□ -0.78
CDX2-202ENST00000548877 A0A0B4J2A0 478 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 OR11H12B2RN74 326 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 H7C2Y5 167 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 ST8SIA5O15466 376 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 PROP1O75360 226 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 DIRAS3O95661 229 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 TRBV12-3P01733 135 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 HLA-AP01891 365 aaKnown RBP10.18□□□□□ -0.78
CDX2-202ENST00000548877 PGAM2P15259 253 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 C4BPBP20851 252 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 HERV-K104P61576 105 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 RPEL1Q2QD12 228 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 CD300EQ496F6 205 aaPredicted RBP10.18□□□□□ -0.78
CDX2-202ENST00000548877 OR5T1Q8NG75 326 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 MARCH1Q8TCQ1 289 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 CYYR1Q96J86 154 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 OVOL2Q9BRP0 275 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 ZNF2Q9BSG1 426 aaPredicted RBP10.18□□□□□ -0.78
CDX2-202ENST00000548877 HDHD3Q9BSH5 251 aaPredicted RBP10.18□□□□□ -0.78
CDX2-202ENST00000548877 SRD5A3Q9H8P0 318 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 Q9N2K0 584 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 SHPKQ9UHJ6 478 aa10.18□□□□□ -0.78
CDX2-202ENST00000548877 PIGBOS1A0A0B4J2F0 54 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 TRDCB7Z8K6 153 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 CTSDP07339 412 aaPredicted RBP10.17□□□□□ -0.78
CDX2-202ENST00000548877 ATF4P18848 351 aaPredicted RBP10.17□□□□□ -0.78
CDX2-202ENST00000548877 ZBTB25P24278 435 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 UCP3P55916 312 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 DEFB114Q30KQ6 69 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 CEMP1Q6PRD7 247 aaPredicted RBP10.17□□□□□ -0.78
CDX2-202ENST00000548877 WFDC3Q8IUB2 231 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 SLC38A6Q8IZM9 456 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 RPP25LQ8N5L8 163 aaKnown RBP10.17□□□□□ -0.78
CDX2-202ENST00000548877 BVESQ8NE79 360 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 OR4A4PQ8NGN8 299 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 COQ8AQ8NI60 647 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 GRPEL2Q8TAA5 225 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 MITD1Q8WV92 249 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 MAFIPQ8WZ33 124 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 ZNF486Q96H40 463 aaPredicted RBP10.17□□□□□ -0.78
CDX2-202ENST00000548877 OR2A7Q96R45 310 aa10.17□□□□□ -0.78
CDX2-202ENST00000548877 DNAH6Q9C0G6 4158 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 C9orf170A2RU37 121 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 FABP7O15540 132 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 SLC22A5O76082 557 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 IGKV1-16P04430 117 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 CRYGBP07316 175 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 AKR1C4P17516 323 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 HLA-GP17693 338 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 CXCL3P19876 107 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 VAMP1P23763 118 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 S100GP29377 79 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 DHODHQ02127 395 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 TNFRSF9Q07011 255 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 FGL1Q08830 312 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 AADACL3Q5VUY0 350 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 PDPNQ86YL7 162 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 CCDC71LQ8N9Z2 235 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 ZBTB8BQ8NAP8 495 aaPredicted RBP10.16□□□□□ -0.78
CDX2-202ENST00000548877 MRGPRFQ96AM1 343 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 ABHD14BQ96IU4 210 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
CDX2-202ENST00000548877 VPS13DQ5THJ4 4388 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 RBMXL2O75526 392 aaKnown RBP10.15□□□□□ -0.78
CDX2-202ENST00000548877 SFT2D2O95562 160 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 KIR2DS2P43631 304 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 CYCSP99999 105 aaKnown RBP10.15□□□□□ -0.78
CDX2-202ENST00000548877 PPP1R1AQ13522 171 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 LGALS9CQ6DKI2 356 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 UXS1Q8NBZ7 420 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 OR52B4Q8NGK2 314 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 OR2T35Q8NGX2 323 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 MOB3AQ96BX8 217 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 PARP12Q9H0J9 701 aaKnown RBP10.15□□□□□ -0.78
CDX2-202ENST00000548877 C5orf66Q9H5L9 145 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
CDX2-202ENST00000548877 KCNIP3Q9Y2W7 256 aa10.15□□□□□ -0.78
CDX2-202ENST00000548877 IGKV1D-8A0A087WSZ0 117 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms