RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CROCCP3Q8IVE0 287 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 OR52B4Q8NGK2 314 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 BORCS5Q969J3 196 aa13.02□□□□□ -0.33
CHMP1A-205ENST00000548650 TNFAIP8O95379 198 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 RFX2P48378 723 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 TAS2R20P59543 309 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 SAMD12Q8N8I0 201 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 TMEM190Q8WZ59 177 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 MARC2Q969Z3 335 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 ZNF2Q9BSG1 426 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 ZNF436Q9C0F3 470 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 THYN1Q9P016 225 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 BIRC6Q9NR09 4857 aa13.01□□□□□ -0.33
CHMP1A-205ENST00000548650 A0A087WXM4 84 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 IGHV3-35A0A0C4DH35 117 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 TGOLN2O43493 480 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 PGLYRP1O75594 196 aaPredicted RBP13□□□□□ -0.33
CHMP1A-205ENST00000548650 OR13C7P0DN81 318 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 NAT1P18440 290 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 F2RP25116 425 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 RPS19P39019 145 aaKnown RBP13□□□□□ -0.33
CHMP1A-205ENST00000548650 MFAP2P55001 183 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 TAS2R46P59540 309 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 ERVK-16P61578 105 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 PLET1Q6UQ28 207 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 DHRS11Q6UWP2 260 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 HSD17B13Q7Z5P4 300 aaPredicted RBP13□□□□□ -0.33
CHMP1A-205ENST00000548650 IL17DQ8TAD2 202 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 YIPF6Q96EC8 236 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 GGTLC1Q9BX51 225 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 UFC1Q9Y3C8 167 aa13□□□□□ -0.33
CHMP1A-205ENST00000548650 TRAV25A0A0B4J276 109 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 PMP2P02689 132 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 SERPINE2P07093 398 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 TRAPPC2P0DI81 140 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 TRAPPC2BP0DI82 140 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 ELLP55199 621 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 ZNF585BQ52M93 769 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 OR1L8Q8NGR8 309 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 OR5H2Q8NGV7 314 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 FCAMRQ8WWV6 532 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 LSM10Q969L4 123 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 NDUFA4L2Q9NRX3 87 aa12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 MRPL27Q9P0M9 148 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-205ENST00000548650 ANKRD55Q3KP44 614 aa12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 CADM3Q8N126 398 aa12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 OR1L6Q8NGR2 347 aa12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 DGCR14Q96DF8 476 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 F11RQ9Y624 299 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 PLECQ15149 4684 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-205ENST00000548650 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 F8W735 103 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 CYB5BO43169 146 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 KRASP01116 189 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 HRH1P35367 487 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 G6PCP35575 357 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 LPAR6P43657 344 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 RBPMS2Q6ZRY4 209 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 BSCL2Q96G97 398 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 C5orf66Q9H5L9 145 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 DAZ1Q9NQZ3 744 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 NSG2Q9Y328 171 aa12.97□□□□□ -0.33
CHMP1A-205ENST00000548650 LOC102724200A0A096LPH7 203 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 K7EIM0 57 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 GPR31O00270 319 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 JTBO76095 146 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 EIF4EP06730 217 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 CMTM1Q8IZ96 169 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 SLC25A46Q96AG3 418 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 ATP6V0BQ99437 205 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 SPAG8Q99932 426 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 OVOL2Q9BRP0 275 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 CHRDL1Q9BU40 450 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 HINT2Q9BX68 163 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 OR51B2Q9Y5P1 312 aa12.96□□□□□ -0.33
CHMP1A-205ENST00000548650 DBX1A6NMT0 343 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 C15orf61A6NNL5 157 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 HLA-DMAP28067 261 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 PRSS3P35030 304 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 ADMP35318 185 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 SLC25A24Q6NUK1 477 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 SPSB3Q6PJ21 355 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 OR5B3Q8NH48 314 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 GPX8Q8TED1 209 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 ZNF414Q96IQ9 312 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 TMEM14BQ9NUH8 114 aa12.95□□□□□ -0.34
CHMP1A-205ENST00000548650 NDUFA4O00483 81 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms