RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DHFRP00374 187 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 CCR6P51684 374 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
DDX54-203ENST00000546869 SRPXP78539 464 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 AARDQ4LEZ3 155 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 ETV3LQ6ZN32 361 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 LHFPL5Q8TAF8 219 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
DDX54-203ENST00000546869 RRNAD1Q96FB5 475 aaKnown RBP11.23□□□□□ -0.61
DDX54-203ENST00000546869 MS4A10Q96PG2 267 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 A0A0B4J293 547 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 CCL24O00175 119 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 LGALS1P09382 135 aaKnown RBP11.22□□□□□ -0.61
DDX54-203ENST00000546869 MYOD1P15172 320 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 HIST1H1BP16401 226 aaKnown RBP11.22□□□□□ -0.61
DDX54-203ENST00000546869 AKR1C2P52895 323 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 TPPP2P59282 170 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 FHL3Q13643 280 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 NECAP1Q8NC96 275 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 RAX2Q96IS3 184 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
DDX54-203ENST00000546869 GNB4Q9HAV0 340 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 CACFD1Q9UGQ2 172 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 NSG2Q9Y328 171 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 VWFP04275 2813 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 PKD1L1Q8TDX9 2849 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 MGAM2Q2M2H8 2515 aa11.22□□□□□ -0.61
DDX54-203ENST00000546869 A0A0B4J2A0 478 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 LINC00854A0A1B0GVQ3 168 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 DBX1A6NMT0 343 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 PF4P02776 101 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 APELAP0DMC3 54 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 AREGP15514 252 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 PRCDQ00LT1 54 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 FAM209BQ5JX69 171 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 TMEM268Q5VZI3 342 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.61
DDX54-203ENST00000546869 LGI3Q8N145 548 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 LINC00482Q8N8I6 264 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 OR52E5Q8NH55 327 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 CASTOR1Q8WTX7 329 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 SHPKQ9UHJ6 478 aa11.21□□□□□ -0.61
DDX54-203ENST00000546869 WNK1Q9H4A3 2382 aa11.21□□□□□ -0.62
DDX54-203ENST00000546869 C13orf42A0A1B0GVH6 325 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 UPK1BO75841 260 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 SFT2D2O95562 160 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 WT1-ASQ06250 92 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 ASAH1Q13510 395 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
DDX54-203ENST00000546869 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 Q6ZRM9 215 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 FANCD2OSQ96PS1 177 aa11.2□□□□□ -0.62
DDX54-203ENST00000546869 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
DDX54-203ENST00000546869 IGLV11-55A0A075B6I3 123 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 CYB5BO43169 146 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
DDX54-203ENST00000546869 HSPB1P04792 205 aaKnown RBP11.19□□□□□ -0.62
DDX54-203ENST00000546869 OR8U8P0C7N1 319 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 RHOGP84095 191 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 ZNF616Q08AN1 781 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 PPP1R1AQ13522 171 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 SLC35G3Q8N808 338 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 OR10W1Q8NGF6 305 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 GPR146Q96CH1 333 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 RANGRFQ9HD47 186 aaPredicted RBP11.19□□□□□ -0.62
DDX54-203ENST00000546869 THYN1Q9P016 225 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 TBC1D24Q9ULP9 559 aa11.19□□□□□ -0.62
DDX54-203ENST00000546869 LINC01619G3V211 115 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 RBMXL2O75526 392 aaKnown RBP11.18□□□□□ -0.62
DDX54-203ENST00000546869 TCRBP04435 133 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 DEFA4P12838 97 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 MECP2P51608 486 aaKnown RBP11.18□□□□□ -0.62
DDX54-203ENST00000546869 RAB25P57735 213 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 IZUMO4Q1ZYL8 232 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 NMSQ5H8A3 153 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 MZT2BQ6NZ67 158 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 OR2C3Q8N628 320 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 ZNF114Q8NC26 417 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 RNASE11Q8TAA1 199 aaKnown RBP11.18□□□□□ -0.62
DDX54-203ENST00000546869 RCC1LQ96I51 464 aaKnown RBP11.18□□□□□ -0.62
DDX54-203ENST00000546869 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
DDX54-203ENST00000546869 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
DDX54-203ENST00000546869 A0A1B0GU03 582 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 C9orf170A2RU37 121 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms