RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 HARBI1Q96MB7 349 aa6.95□□□□□ -1.3
SSH1-205ENST00000546812 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
SSH1-205ENST00000546812 FBXL15Q9H469 300 aa6.95□□□□□ -1.3
SSH1-205ENST00000546812 SLC2A9Q9NRM0 540 aa6.95□□□□□ -1.3
SSH1-205ENST00000546812 SCP2D1Q9UJQ7 156 aa6.95□□□□□ -1.3
SSH1-205ENST00000546812 DYNC1H1Q14204 4646 aaKnown RBP6.95□□□□□ -1.3
SSH1-205ENST00000546812 HERC1Q15751 4861 aa6.95□□□□□ -1.3
SSH1-205ENST00000546812 FAT2Q9NYQ8 4349 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 MUC4Q99102 2169 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 RRHO14718 337 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 PGLYRP1O75594 196 aaPredicted RBP6.94□□□□□ -1.3
SSH1-205ENST00000546812 UPK1BO75841 260 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 CTSDP07339 412 aaPredicted RBP6.94□□□□□ -1.3
SSH1-205ENST00000546812 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
SSH1-205ENST00000546812 BTCP35070 178 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 KIR2DS2P43631 304 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 CCR6P51684 374 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 PIGPP57054 158 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 CD300EQ496F6 205 aaPredicted RBP6.94□□□□□ -1.3
SSH1-205ENST00000546812 LPCAT3Q6P1A2 487 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 TBC1D26Q86UD7 250 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 OR4S2Q8NH73 311 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 DEDD2Q8WXF8 326 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 FAM103A1Q9BTL3 118 aaKnown RBP6.94□□□□□ -1.3
SSH1-205ENST00000546812 C14orf166Q9Y224 244 aaKnown RBP6.94□□□□□ -1.3
SSH1-205ENST00000546812 PRELID3BQ9Y3B1 194 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
SSH1-205ENST00000546812 NAP1L6A6NFF2 107 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 CENPXA8MT69 81 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 H3BUA1 57 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 SHOXO15266 292 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 PLA2G10O15496 165 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 LYRM1O43325 122 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 OR2A4O95047 310 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 S1PR2O95136 353 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 RRASP10301 218 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 S100GP29377 79 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 BRWD1-AS2P59051 145 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 RND3P61587 244 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 RPS16P62249 146 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 PRR20EP86478 221 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 PRR20CP86479 221 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 PRR20DP86480 221 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 PRR20BP86481 221 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 PRR20AP86496 221 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 TAGLNQ01995 201 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 PLGLAQ15195 96 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 SURF2Q15527 256 aaPredicted RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 TMEM177Q53S58 311 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 ZNF562Q6V9R5 426 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 TMED4Q7Z7H5 227 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 LYG2Q86SG7 212 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 WFDC3Q8IUB2 231 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 SPAG16Q8N0X2 631 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 CCDC71LQ8N9Z2 235 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 POC5Q8NA72 575 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 ADAD2Q8NCV1 583 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 ZFAND1Q8TCF1 268 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 ZNF486Q96H40 463 aaPredicted RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 TSC22D3Q99576 134 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 TSNAXQ99598 290 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 C7orf50Q9BRJ6 194 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 GGTLC1Q9BX51 225 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 C5orf66Q9H5L9 145 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 ZNF355PQ9NSJ1 428 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 COPZ2Q9P299 210 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 METTL1Q9UBP6 276 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 PEF1Q9UBV8 284 aaKnown RBP6.93□□□□□ -1.3
SSH1-205ENST00000546812 TBC1D24Q9ULP9 559 aa6.93□□□□□ -1.3
SSH1-205ENST00000546812 DNAH6Q9C0G6 4158 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 MPPED1O15442 326 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 SPDEFO95238 335 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 IGLV2-23P01705 113 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 F2RP25116 425 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 IFITM3Q01628 133 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 ASAH1Q13510 395 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 PSG5Q15238 335 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 RBMS2Q15434 407 aaKnown RBP6.92□□□□□ -1.3
SSH1-205ENST00000546812 RPEL1Q2QD12 228 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 DEFB114Q30KQ6 69 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 ZNF343Q6P1L6 599 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 LINC00336Q6ZUF6 198 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 VKORC1L1Q8N0U8 176 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 OSR1Q8TAX0 266 aaPredicted RBP6.92□□□□□ -1.3
SSH1-205ENST00000546812 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
SSH1-205ENST00000546812 TMEM230Q96A57 120 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 RTBDNQ9BSG5 229 aaPredicted RBP6.92□□□□□ -1.3
SSH1-205ENST00000546812 NAA60Q9H7X0 242 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 GPR132Q9UNW8 380 aa6.92□□□□□ -1.3
SSH1-205ENST00000546812 LOC102724200A0A096LPH7 203 aaPredicted RBP6.91□□□□□ -1.3
SSH1-205ENST00000546812 TEX13DA0A0J9YY54 714 aaPredicted RBP6.91□□□□□ -1.3
SSH1-205ENST00000546812 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
SSH1-205ENST00000546812 CRYM-AS1A6NIL9 109 aa6.91□□□□□ -1.3
SSH1-205ENST00000546812 SRRM4A7MD48 611 aaKnown RBP6.91□□□□□ -1.3
SSH1-205ENST00000546812 RBFOX2O43251 390 aaKnown RBP eCLIP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms