RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 COL4A3Q01955 1670 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 APOMO95445 188 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 SRD5A2P31213 254 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 HERV-K104P63124 156 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 ANXA2RQ3ZCQ2 193 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 FNDC7Q5VTL7 733 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 TEPPQ6URK8 271 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 OSTCQ9NRP0 149 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 KIAA1549Q9HCM3 1950 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 A0A096LPE4 126 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 A0A1W2PPZ6 126 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 EFEMP2O95967 443 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 P01737 135 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 PRSS1P07477 247 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 DEFB103AP81534 67 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 RUNX3Q13761 415 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 EDDM3AQ14507 147 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 SPATA31B1PQ5VZV4 182 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 KIR3DL3Q8N743 410 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 RBMXL3Q8N7X1 1067 aaKnown RBP8.7□□□□□ -1.02
SOD2-216ENST00000546260 ZNF418Q8TF45 676 aaPredicted RBP8.7□□□□□ -1.02
SOD2-216ENST00000546260 AP5S1Q9NUS5 200 aa8.7□□□□□ -1.02
SOD2-216ENST00000546260 IGKV1-27A0A075B6S5 117 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 A0A1W2PQD3 144 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 PSMB11A5LHX3 300 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 SMIM17P0DL12 118 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 WFDC3Q8IUB2 231 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 ABHD12Q8N2K0 398 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 DEFB119Q8N690 84 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 GALMQ96C23 342 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 PSG11Q9UQ72 335 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 A8MWL6 223 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 C9orf172C9J069 976 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 K7EN84 100 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 ANOS1P23352 680 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 GFERP55789 205 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 C3AR1Q16581 482 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 LINC00173Q6ZV60 143 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 SH2D6Q7Z4S9 175 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 DRAM1Q8N682 238 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 SSC4DQ8WTU2 575 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 STRADBQ9C0K7 418 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 PLCE1Q9P212 2302 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 H0YJW9 148 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 GRPP07492 148 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 CCL1P22362 96 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 HBBP68871 147 aa8.69□□□□□ -1.02
SOD2-216ENST00000546260 MRPL16Q9NX20 251 aaKnown RBP8.69□□□□□ -1.02
SOD2-216ENST00000546260 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
SOD2-216ENST00000546260 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 VEGFBP49765 207 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 PSG7Q13046 419 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 PRSS57Q6UWY2 283 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 TMEM14EPQ6UXP3 125 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 ARPC1AQ92747 370 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 RABAC1Q9UI14 185 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 V9GYV3 84 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.68□□□□□ -1.02
SOD2-216ENST00000546260 ATP5G2Q06055 141 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 TBR1Q16650 682 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 TEX29Q8N6K0 151 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 MS4A5Q9H3V2 200 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 COX7A2P2O60397 106 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 MPDU1O75352 247 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 FOXH1O75593 365 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 SPACA3Q8IXA5 215 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 Q8N976 141 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 OR13H1Q8NG92 308 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 TMSB15BA0A087X1C1 80 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
SOD2-216ENST00000546260 SRYQ05066 204 aa8.68□□□□□ -1.02
SOD2-216ENST00000546260 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 F2RL2O00254 374 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 SPINT2O43291 252 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 SYNGR1O43759 233 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 NGFP01138 241 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 REG1AP05451 166 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 ARG2P78540 354 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
SOD2-216ENST00000546260 BCL6BQ8N143 479 aaPredicted RBP8.67□□□□□ -1.02
SOD2-216ENST00000546260 UCN2Q96RP3 112 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 C1QTNF5Q9BXJ0 243 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 C11orf1Q9H5F2 150 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 TPRP12270 2363 aaKnown RBP8.67□□□□□ -1.02
SOD2-216ENST00000546260 TRGV10A0A0A0MS01 117 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 TNFSF11O14788 317 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 FAM222BQ8WU58 562 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 ZNF479Q96JC4 524 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 LINC00470Q9BZP3 86 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 ARHGEF17Q96PE2 2063 aaPredicted RBP8.67□□□□□ -1.02
SOD2-216ENST00000546260 J3QR06 171 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 COL8A1P27658 744 aa8.67□□□□□ -1.02
SOD2-216ENST00000546260 FGF12P61328 243 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms