RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DLX1P56177 255 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 SEBOXQ9HB31 216 aaPredicted RBP4.84□□□□□ -1.63
VPS50-220ENST00000544910 TFF1P04155 84 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 IL6RP08887 468 aaPredicted RBP4.84□□□□□ -1.63
VPS50-220ENST00000544910 AREGP15514 252 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 ORM2P19652 201 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 COX7A1P24310 79 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 REG1BP48304 166 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 C20orf204Q6ZNR8 217 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 OR8I2Q8N0Y5 310 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 STPG3Q8N7X2 389 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 ZNRF1Q8ND25 227 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 OR4X1Q8NH49 305 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 GLRXP35754 106 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 CCL8P80075 99 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 CYP2G1PQ6ZSU1 146 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 ABHD12Q8N2K0 398 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 DCTN5Q9BTE1 182 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 ASCL3Q9NQ33 180 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 TRAV1-1A0A0B4J248 108 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 TM4SF5O14894 197 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 NDUFA2O43678 99 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 YPEL1O60688 119 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 FREM3P0C091 2139 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 LYZP61626 148 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 GNB2P62879 340 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 FBLN7Q53RD9 439 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 TMEM170AQ8WVE7 144 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 YPEL2Q96QA6 119 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 HS3ST6Q96QI5 342 aa4.84□□□□□ -1.64
VPS50-220ENST00000544910 MRPL37Q9BZE1 423 aaKnown RBP4.84□□□□□ -1.64
VPS50-220ENST00000544910 KBTBD11-OT1A0A1B0GTJ5 212 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 A1L4Q6 167 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 OR4C46A6NHA9 309 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 IGKV1-5P01602 117 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 SRIP30626 198 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 RAB37Q96AX2 223 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 ZNF430Q9H8G1 570 aaPredicted RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 UNC13CQ8NB66 2214 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 ZNF503-AS2A6NEH8 195 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 ZNF785A8K8V0 405 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 GCHFRP30047 84 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 MORN2Q502X0 79 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 HEPN1Q6WQI6 88 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 NUDT10Q8NFP7 164 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 OR10AG1Q8NH19 301 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 TMEM171Q8WVE6 324 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 PAXXQ9BUH6 204 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 MS4A5Q9H3V2 200 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 RFNGQ9Y644 331 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 KIF26BQ2KJY2 2108 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 IGKV1-6A0A0C4DH72 117 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 NUDT3O95989 172 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 OR9G9P0C7N8 305 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 RPL11P62913 178 aaKnown RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 RELBQ01201 579 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 IL15RAQ13261 267 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 NUDT11Q96G61 164 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 SIGMAR1Q99720 223 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 RAB1BQ9H0U4 201 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 JKAMPQ9P055 326 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 GOLGB1Q14789 3259 aaKnown RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 PPIHO43447 177 aaKnown RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 PQLC2Q6ZP29 291 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 FAM57AQ8TBR7 257 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 C19orf24Q9BVV8 132 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 MRPL32Q9BYC8 188 aaKnown RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 PLSCR4Q9NRQ2 329 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 CACNA1CQ13936 2221 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 SAA2-SAA4A0A096LPE2 208 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 SAA2P0DJI9 122 aaPredicted RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 CD40P25942 277 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 RPL30P62888 115 aaKnown RBP4.83□□□□□ -1.64
VPS50-220ENST00000544910 MMD2Q8IY49 270 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 KCNS1Q96KK3 526 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 DERL1Q9BUN8 251 aa4.83□□□□□ -1.64
VPS50-220ENST00000544910 LOC107984156A0A0G2JMH3 177 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 A0A0G2JRQ6 117 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 C15orf61A6NNL5 157 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 ARL17AQ8IVW1 177 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 GBGT1Q8N5D6 347 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 FAM169BQ8N8A8 192 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 RALGAPA1Q6GYQ0 2036 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 IGHG3P01860 377 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 CD55P08174 381 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 MC5RP33032 325 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 BMI1P35226 326 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 MAS1LP35410 378 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 CEACAM3P40198 252 aa4.82□□□□□ -1.64
VPS50-220ENST00000544910 ATP5IP56385 69 aaPredicted RBP4.82□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms