RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 CTRB1P17538 263 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 AP3S2P59780 193 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 KRTAP10-11P60412 298 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 EXOSC2Q13868 293 aaKnown RBP16.77■□□□□ 0.28
OTUB1-212ENST00000543988 PDLIM3Q53GG5 364 aaPredicted RBP16.77■□□□□ 0.28
OTUB1-212ENST00000543988 CTRB2Q6GPI1 263 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 H2BFWTQ7Z2G1 175 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 OR1L8Q8NGR8 309 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 FANCD2OSQ96PS1 177 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 TSC22D3Q99576 134 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 SRSF8Q9BRL6 282 aaKnown RBP16.77■□□□□ 0.28
OTUB1-212ENST00000543988 TMEM14BQ9NUH8 114 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 SCP2D1Q9UJQ7 156 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 GPR132Q9UNW8 380 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 IGKV1-5P01602 117 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 TRAPPC2P0DI81 140 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 TRAPPC2BP0DI82 140 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 UCP1P25874 307 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 ATP5G2Q06055 141 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 EGFEM1PQ0D2K5 195 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 TRIM16LQ309B1 348 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 TOMM5Q8N4H5 51 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 HINT2Q9BX68 163 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 NAA60Q9H7X0 242 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 RANGRFQ9HD47 186 aaPredicted RBP16.76■□□□□ 0.27
OTUB1-212ENST00000543988 NDUFA4L2Q9NRX3 87 aa16.76■□□□□ 0.27
OTUB1-212ENST00000543988 OVOL1O14753 267 aa16.75■□□□□ 0.27
OTUB1-212ENST00000543988 FAUP35544 74 aaKnown RBP16.75■□□□□ 0.27
OTUB1-212ENST00000543988 WT1-ASQ06250 92 aa16.75■□□□□ 0.27
OTUB1-212ENST00000543988 IZUMO4Q1ZYL8 232 aa16.75■□□□□ 0.27
OTUB1-212ENST00000543988 C15orf32Q32M92 178 aa16.75■□□□□ 0.27
OTUB1-212ENST00000543988 THOC7Q6I9Y2 204 aaKnown RBP16.75■□□□□ 0.27
OTUB1-212ENST00000543988 AURKAIP1Q9NWT8 199 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-212ENST00000543988 FBXL7Q9UJT9 491 aa16.75■□□□□ 0.27
OTUB1-212ENST00000543988 IGLV11-55A0A075B6I3 123 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 TEX13DA0A0J9YY54 714 aaPredicted RBP16.74■□□□□ 0.27
OTUB1-212ENST00000543988 CRYM-AS1A6NIL9 109 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 B3GALNT1O75752 331 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 DHFRP00374 187 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 OR5AC1P0C628 307 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 P0C879 139 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 OR13C7P0DN81 318 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 AKR1C2P52895 323 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 KLK9Q2XQG4 91 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 C9orf66Q5T8R8 295 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 GDPD1Q8N9F7 314 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 OR5B3Q8NH48 314 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 TMEM222Q9H0R3 208 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 PEF1Q9UBV8 284 aaKnown RBP16.74■□□□□ 0.27
OTUB1-212ENST00000543988 KLK9Q9UKQ9 250 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 DMRT1Q9Y5R6 373 aa16.74■□□□□ 0.27
OTUB1-212ENST00000543988 NDUFB8O95169 186 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 DEFA4P12838 97 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 ZP3P21754 424 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 REC114Q7Z4M0 266 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 OR4A16Q8NH70 328 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 LSM10Q969L4 123 aaKnown RBP16.73■□□□□ 0.27
OTUB1-212ENST00000543988 TMEM230Q96A57 120 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 FKBP11Q9NYL4 201 aa16.73■□□□□ 0.27
OTUB1-212ENST00000543988 HSD17B13Q7Z5P4 300 aaPredicted RBP16.72■□□□□ 0.27
OTUB1-212ENST00000543988 LHFPL5Q8TAF8 219 aa16.72■□□□□ 0.27
OTUB1-212ENST00000543988 GLYATL2Q8WU03 294 aa16.72■□□□□ 0.27
OTUB1-212ENST00000543988 SDHCQ99643 169 aaPredicted RBP16.72■□□□□ 0.27
OTUB1-212ENST00000543988 S4R3C0 116 aa16.72■□□□□ 0.27
OTUB1-212ENST00000543988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.71■□□□□ 0.27
OTUB1-212ENST00000543988 A0A0G2JRQ6 117 aa16.71■□□□□ 0.27
OTUB1-212ENST00000543988 BMPR1BO00238 502 aa16.71■□□□□ 0.27
OTUB1-212ENST00000543988 ATG12O94817 140 aa16.71■□□□□ 0.27
OTUB1-212ENST00000543988 HIST1H1BP16401 226 aaKnown RBP16.71■□□□□ 0.27
OTUB1-212ENST00000543988 BAK1Q16611 211 aa16.71■□□□□ 0.27
OTUB1-212ENST00000543988 ZNF57Q68EA5 555 aaPredicted RBP16.71■□□□□ 0.27
OTUB1-212ENST00000543988 SCGB3A2Q96PL1 93 aa16.71■□□□□ 0.27
OTUB1-212ENST00000543988 A0A0B4J293 547 aa16.7■□□□□ 0.26
OTUB1-212ENST00000543988 CDS2O95674 445 aa16.7■□□□□ 0.26
OTUB1-212ENST00000543988 IGHV3-23P01764 117 aa16.7■□□□□ 0.26
OTUB1-212ENST00000543988 TRIQKQ629K1 86 aa16.7■□□□□ 0.26
OTUB1-212ENST00000543988 DEDD2Q8WXF8 326 aa16.7■□□□□ 0.26
OTUB1-212ENST00000543988 CCDC140Q96MF4 163 aa16.7■□□□□ 0.26
OTUB1-212ENST00000543988 MFSD2BA6NFX1 497 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 MECP2P51608 486 aaKnown RBP16.69■□□□□ 0.26
OTUB1-212ENST00000543988 MFAP2P55001 183 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 SYNJ2BPP57105 145 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 HSPE1P61604 102 aaKnown RBP16.69■□□□□ 0.26
OTUB1-212ENST00000543988 PRCDQ00LT1 54 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 DHODHQ02127 395 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 KLF5Q13887 457 aaPredicted RBP16.69■□□□□ 0.26
OTUB1-212ENST00000543988 ACSM6Q6P461 480 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 SGPP2Q8IWX5 399 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 RNASE11Q8TAA1 199 aaKnown RBP16.69■□□□□ 0.26
OTUB1-212ENST00000543988 RRNAD1Q96FB5 475 aaKnown RBP16.69■□□□□ 0.26
OTUB1-212ENST00000543988 TMEM56Q96MV1 263 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 PRR13Q9NZ81 148 aa16.69■□□□□ 0.26
OTUB1-212ENST00000543988 F11RQ9Y624 299 aaKnown RBP16.69■□□□□ 0.26
OTUB1-212ENST00000543988 A6NHS1 94 aa16.68■□□□□ 0.26
OTUB1-212ENST00000543988 SAP30O75446 220 aa16.68■□□□□ 0.26
OTUB1-212ENST00000543988 AKR1C4P17516 323 aa16.68■□□□□ 0.26
OTUB1-212ENST00000543988 RPEL1Q2QD12 228 aa16.68■□□□□ 0.26
OTUB1-212ENST00000543988 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
OTUB1-212ENST00000543988 ZNF429Q86V71 674 aa16.68■□□□□ 0.26
OTUB1-212ENST00000543988 SELENOHQ8IZQ5 122 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms