RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 UXS1Q8NBZ7 420 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 ZNF502Q8TBZ5 544 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 VN1R17PQ8TDU5 208 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 CACNG8Q8WXS5 425 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 MOB3AQ96BX8 217 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 ZNF2Q9BSG1 426 aaPredicted RBP9.88□□□□□ -0.83
RTN3-212ENST00000543123 S4R3C0 116 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 SNAPC5O75971 98 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 RLN1P04808 185 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 GNRHRP30968 328 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 PRSS3P35030 304 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 TAS2R20P59543 309 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 OR1L6Q8NGR2 347 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
RTN3-212ENST00000543123 ATP6V0BQ99437 205 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 MRPL27Q9P0M9 148 aaKnown RBP9.87□□□□□ -0.83
RTN3-212ENST00000543123 MLXQ9UH92 298 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
RTN3-212ENST00000543123 A0A087WXM4 84 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-212ENST00000543123 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-212ENST00000543123 GPR31O00270 319 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 PGLYRP1O75594 196 aaPredicted RBP9.86□□□□□ -0.83
RTN3-212ENST00000543123 JTBO76095 146 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 SERPINE2P07093 398 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-212ENST00000543123 OR13C7P0DN81 318 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 RFX2P48378 723 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 LPCAT3Q6P1A2 487 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 SPSB3Q6PJ21 355 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 SLC38A6Q8IZM9 456 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
RTN3-212ENST00000543123 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
RTN3-212ENST00000543123 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 GGTLC1Q9BX51 225 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 WFDC10AQ9H1F0 79 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 RETNQ9HD89 108 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 PRNDQ9UKY0 176 aa9.86□□□□□ -0.83
RTN3-212ENST00000543123 SMIM31A0A1B0GVY4 71 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 TGOLN2O43493 480 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 SCAF4O95104 1147 aaKnown RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 TNFAIP8O95379 198 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 KRASP01116 189 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 PMP2P02689 132 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 C8orf88P0DMB2 117 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 NAT1P18440 290 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 EDN2P20800 178 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 RPS19P39019 145 aaKnown RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 SLC25A24Q6NUK1 477 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 UNQ9165/PRO28630Q6UXU0 137 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 OR10W1Q8NGF6 305 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 SPAG8Q99932 426 aaPredicted RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 ZNF436Q9C0F3 470 aaPredicted RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 GAR1Q9NY12 217 aaKnown RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
RTN3-212ENST00000543123 F11RQ9Y624 299 aaKnown RBP9.85□□□□□ -0.83
RTN3-212ENST00000543123 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
RTN3-212ENST00000543123 TEX50A0A1B0GTY4 177 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 RPA2P15927 270 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 HRH1P35367 487 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 LPAR6P43657 344 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 TSPAN5P62079 268 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 OR2C3Q8N628 320 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 FCAMRQ8WWV6 532 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 SLC25A46Q96AG3 418 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 YIPF6Q96EC8 236 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 CMTM3Q96MX0 182 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 SCPEP1Q9HB40 452 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
RTN3-212ENST00000543123 DNAH1Q9P2D7 4330 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 OR2T8A6NH00 312 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 NDUFA4O00483 81 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 APOA1P02647 267 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 G6PCP35575 357 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 APOC4P55056 127 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 LSM3P62310 102 aaKnown RBP9.83□□□□□ -0.84
RTN3-212ENST00000543123 FXYD6Q9H0Q3 95 aa9.83□□□□□ -0.84
RTN3-212ENST00000543123 IGHV3-35A0A0C4DH35 117 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 HLA-DMAP28067 261 aa9.82□□□□□ -0.84
RTN3-212ENST00000543123 RCVRNP35243 200 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms