RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	TMEM265	A0A087WTH1	108 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	MYOD1	P15172	320 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	TNFSF10	P50591	281 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	RPL19	P84098	196 aa	Known RBP	10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	PRR20E	P86478	221 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	PRR20C	P86479	221 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	PRR20D	P86480	221 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	PRR20B	P86481	221 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	PRR20A	P86496	221 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	KIAA1644	Q3SXP7	199 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	OR4A47	Q6IF82	309 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	ZNRF1	Q8ND25	227 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	FAM216A	Q8WUB2	273 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	DDB2	Q92466	427 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	SFXN3	Q9BWM7	321 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	RNASE7	Q9H1E1	156 aa	Known RBP	10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	GOLT1B	Q9Y3E0	138 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	RNF114	Q9Y508	228 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	F2RL2	O00254	374 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	GPX1	P07203	203 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	BRS3	P32247	399 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	SLC35B1	P78383	322 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	FXYD3	Q14802	87 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	UTF1	Q5T230	341 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	VWA1	Q6PCB0	445 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	FAM122A	Q96E09	287 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	ZNF586	Q9NXT0	402 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	IL19	Q9UHD0	177 aa		10.63	□□□□□ -0.71
DDX11-223	ENST00000542838	SRRM5	B3KS81	715 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	LINC00869	P0C866	280 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	CORO2A	Q92828	525 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	NEUROG1	Q92886	237 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	NABP2	Q9BQ15	211 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	TMEM167B	Q9NRX6	74 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	TMEM14B	Q9NUH8	114 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	CALY	Q9NYX4	217 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	SLC45A2	Q9UMX9	530 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	FOXA2	Q9Y261	457 aa	Predicted RBP	10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	AHRR	A9YTQ3	701 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	DIRC3	C9JPN6	131 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	CX3CL1	P78423	397 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	MZT1	Q08AG7	82 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	WDR73	Q6P4I2	378 aa		10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	TBL2	Q9Y4P3	447 aa	Known RBP	10.62	□□□□□ -0.71
DDX11-223	ENST00000542838	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	MT-ND6	P03923	174 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	BTF3	P20290	206 aa	Known RBP	10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	AMT	P48728	403 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	TCL1A	P56279	114 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	CR1L	Q2VPA4	569 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	TIGIT	Q495A1	244 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	MBNL2	Q5VZF2	373 aa	Known RBP	10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	ARRDC1-AS1	Q9H2J1	176 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	LPAR2	Q9HBW0	351 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	TUBG2	Q9NRH3	451 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	NPS	P0C0P6	89 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	OR10J4	P0C629	311 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	KIR2DL2	P43627	348 aa	Predicted RBP	10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	RAB7A	P51149	207 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	TMEM136	Q6ZRR5	245 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	NRN1	Q9NPD7	142 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	IDI2-AS1	Q9NZ38	188 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	OR51B2	Q9Y5P1	312 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	ARL2-SNX15	V9GYD0	113 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	SAA2-SAA4	A0A096LPE2	208 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	OR7C2	O60412	319 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	ZNF883	P0CG24	379 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	SAA2	P0DJI9	122 aa	Predicted RBP	10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	PMCH	P20382	165 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	CT45A1	Q5HYN5	189 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	GCSAM	Q8N6F7	178 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	OR4B1	Q8NGF8	309 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	CT45A3	Q8NHU0	189 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	PLEKHA3	Q9HB20	300 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	GCM1	Q9NP62	436 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	OSTC	Q9NRP0	149 aa		10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	TECR	Q9NZ01	308 aa	Known RBP	10.61	□□□□□ -0.71
DDX11-223	ENST00000542838	GATA2	P23769	480 aa	Predicted RBP	10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	OR10J3	Q5JRS4	329 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	MOB3B	Q86TA1	216 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	ZDBF2	Q9HCK1	2354 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	IGHV1-18	A0A0C4DH31	117 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	ZNF253	O75346	499 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	MGST1	P10620	155 aa	Known RBP	10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	GAGE1	Q13065	139 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	GUSBP1	Q15486	140 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	MRPL54	Q6P161	138 aa	Known RBP	10.6	□□□□□ -0.71
DDX11-223	ENST00000542838		Q8N976	141 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	ZNF503	Q96F45	646 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	KCNS1	Q96KK3	526 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	RCHY1	Q96PM5	261 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	RNF2	Q99496	336 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838	SERTAD4	Q9NUC0	356 aa		10.6	□□□□□ -0.71
DDX11-223	ENST00000542838		J3QR06	171 aa		10.59	□□□□□ -0.71
DDX11-223	ENST00000542838	OR5G3	P0C626	314 aa		10.59	□□□□□ -0.71
DDX11-223	ENST00000542838	SUMO1	P63165	101 aa	Known RBP	10.59	□□□□□ -0.71
DDX11-223	ENST00000542838	COX19	Q49B96	90 aa		10.59	□□□□□ -0.71
DDX11-223	ENST00000542838	LYG1	Q8N1E2	194 aa		10.59	□□□□□ -0.71
DDX11-223	ENST00000542838	C9orf106	Q8NAJ2	232 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms