RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CT45A6P0DMU7 189 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CT45A5P0DMU8 189 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CT45A7P0DMV0 189 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CALCBP10092 127 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 H2AFXP16104 143 aaPredicted RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CD36P16671 472 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PTBP1P26599 531 aaKnown RBP eCLIP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 HTR2CP28335 458 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 EIF2B2P49770 351 aaKnown RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 BRWD1-AS2P59051 145 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 RPP30P78346 268 aaKnown RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CTAG1AP78358 180 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 KRR1Q13601 381 aaKnown RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 TNXAQ16473 311 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 KCTD21Q4G0X4 260 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 TP53I3Q53FA7 332 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CYBRD1Q53TN4 286 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 YIF1BQ5BJH7 314 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DDI2Q5TDH0 399 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 FAM71F2Q6NXP2 309 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DPY19L2P2Q6ZN68 376 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF493Q6ZR52 646 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PEX26Q7Z412 305 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 OAFQ86UD1 273 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 LCA5Q86VQ0 697 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 FAM219AQ8IW50 185 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 LINC00612Q8N6U2 182 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF709Q8N972 641 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR8J2Q8NGG1 315 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR6T1Q8NGN1 323 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PFN4Q8NHR9 129 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMEM167AQ8TBQ9 72 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DCANP1Q8TF63 244 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMEM239Q8WW34 195 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 ASB17Q8WXJ9 295 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 ACOT12Q8WYK0 555 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 MUL1Q969V5 352 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC25A46Q96AG3 418 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 C16orf74Q96GX8 76 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR10C1Q96KK4 312 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 C2orf50Q96LR7 162 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRPL57Q9BQC6 102 aaKnown RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 GINS3Q9BRX5 216 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 COMMD4Q9H0A8 199 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC35B3Q9H1N7 401 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 VSIRQ9H7M9 311 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PLEKHA2Q9HB19 425 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 HMG20AQ9NP66 347 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DCAF13Q9NV06 445 aaKnown RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DNAJC27Q9NZQ0 273 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 THYN1Q9P016 225 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRO0255Q9UI72 69 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 V9GYY5 206 aaPredicted RBP1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 TRGV2A0A075B6R0 118 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 IGKV1OR2-108A0A075B7D4 117 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 TRAV27A0A087WT01 109 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 IGHV3-66A0A0C4DH42 116 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 KRTAP16-1A8MUX0 517 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 GGTLC3B5MD39 225 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 RAB29O14966 203 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 CIDEAO60543 219 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 E2F6O75461 281 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 SERPINB7O75635 380 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 TSHBP01222 138 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 IGKV1-16P04430 117 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 LINC00032P0C843 101 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 SAA2P0DJI9 122 aaPredicted RBP1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 HTN1P15515 57 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 RPS27P42677 84 aaKnown RBP1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 KCNJ3P48549 501 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 NME5P56597 212 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 CLDN8P56748 225 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 CLDN12P56749 244 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 TAS2R60P59551 318 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 MS4A2Q01362 244 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 RPL18AQ02543 176 aaKnown RBP1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 PAX5Q02548 391 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 IL13RA2Q14627 380 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 CASP8Q14790 479 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 ZNF846Q147U1 533 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 TBCEQ15813 527 aaPredicted RBP1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 KLK9Q2XQG4 91 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 MAJINQ3KP22 176 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 MORN2Q502X0 79 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 PCOTHQ58A44 107 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 SPINK9Q5DT21 86 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 RSBN1Q5VWQ0 802 aaPredicted RBP1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 SPATA31B1PQ5VZV4 182 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 Q6P435 159 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 Q6Q795 121 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 TBC1D26Q86UD7 250 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 COMMD2Q86X83 199 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 PDPNQ86YL7 162 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 CTAGE3PQ8IX95 158 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 FAM86B1Q8N7N1 296 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 OR8D4Q8NGM9 314 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 TYMSOSQ8TAI1 123 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 VN1R17PQ8TDU5 208 aa1.15□□□□□ -2.23
TRAV1-1-201ENST00000542354 PCNPQ8WW12 178 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms