RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CXXC4Q9H2H0 198 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 TPPP2P59282 170 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 TMEM144Q7Z5S9 345 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 ZCCHC24Q8N2G6 241 aaKnown RBP12.67□□□□□ -0.38
CNOT9-208ENST00000542068 LRFN3Q9BTN0 628 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 TP53TG3Q9ULZ0 132 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 PLXNB1O43157 2135 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 NPSP0C0P6 89 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 PRDX2P32119 198 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 C11orf53Q8IXP5 236 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 ATOH7Q8N100 152 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 ZBTB34Q8NCN2 500 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
CNOT9-208ENST00000542068 CRYBB3P26998 211 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 VAMP8Q9BV40 100 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 RNF114Q9Y508 228 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 CA1P00915 261 aaPredicted RBP12.66□□□□□ -0.38
CNOT9-208ENST00000542068 IL6RP08887 468 aaPredicted RBP12.66□□□□□ -0.38
CNOT9-208ENST00000542068 NTF3P20783 257 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 GCHFRP30047 84 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 DUTP33316 252 aaKnown RBP12.66□□□□□ -0.38
CNOT9-208ENST00000542068 PSG5Q15238 335 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 SPRNQ5BIV9 151 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 SLC35E4Q6ICL7 350 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 STPG3Q8N7X2 389 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 OR2V2Q96R30 315 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 TMEM140Q9NV12 185 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 CXorf1O96002 111 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 IGFBP2P18065 325 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 OR5AU1Q8NGC0 362 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 S1PR3Q99500 378 aa12.66□□□□□ -0.38
CNOT9-208ENST00000542068 IQCF6A8MYZ5 107 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 AHRRA9YTQ3 701 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 OR7C2O60412 319 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 ZNF134P52741 427 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 MLANAQ16655 118 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 PQLC2Q6ZP29 291 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 UHRF2Q96PU4 802 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 KMT2EQ8IZD2 1858 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 TET2Q6N021 2002 aaPredicted RBP12.65□□□□□ -0.38
CNOT9-208ENST00000542068 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.38
CNOT9-208ENST00000542068 IGHV3-48P01763 117 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 FOXL1Q12952 345 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 MMD2Q8IY49 270 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 TCF19Q9Y242 345 aa12.65□□□□□ -0.38
CNOT9-208ENST00000542068 EFNB3Q15768 340 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 BHLHA15Q7RTS1 189 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-208ENST00000542068 FAM19A2Q8N3H0 131 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 SIGLECL1Q8N7X8 197 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 DIRC2Q96SL1 478 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 TUBG2Q9NRH3 451 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 ZNF292O60281 2723 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 IGHV2OR16-5A0A0B4J2B6 119 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 STAG3L3P0CL85 134 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 AMTP48728 403 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 LINC00310P59036 64 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 EIF4EBP1Q13541 118 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-208ENST00000542068 ZADH2Q8N4Q0 377 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 WDR31Q8NA23 367 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 ENY2Q9NPA8 101 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 ZNRD1Q9P1U0 126 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 CLCF1Q9UBD9 225 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 A8MXE2 369 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 KLK10O43240 276 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-208ENST00000542068 WNT10AQ9GZT5 417 aa12.64□□□□□ -0.39
CNOT9-208ENST00000542068 IGHV1-18A0A0C4DH31 117 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 GFRA3O60609 400 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 RPLP1P05386 114 aaKnown RBP12.63□□□□□ -0.39
CNOT9-208ENST00000542068 C1orf229Q6ZS94 237 aaPredicted RBP12.63□□□□□ -0.39
CNOT9-208ENST00000542068 SSBP3Q9BWW4 388 aaPredicted RBP12.63□□□□□ -0.39
CNOT9-208ENST00000542068 RAB4AP20338 218 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 OPRK1P41145 380 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 CENPWQ5EE01 88 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 DUX4L9Q6RFH8 374 aaPredicted RBP12.63□□□□□ -0.39
CNOT9-208ENST00000542068 LYG1Q8N1E2 194 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
CNOT9-208ENST00000542068 CCL8P80075 99 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 LOXL4Q96JB6 756 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 GNB4Q9HAV0 340 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 PLEKHA3Q9HB20 300 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 IL36BQ9NZH7 164 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 FBXL7Q9UJT9 491 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 GOLT1BQ9Y3E0 138 aa12.63□□□□□ -0.39
CNOT9-208ENST00000542068 NCOR2Q9Y618 2525 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 PRR33A8MZF0 331 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 CA2P00918 260 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 GNG4P50150 75 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 RPEL1Q2QD12 228 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms