RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ETV6P41212 452 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 MFAP2P55001 183 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 ATP5G2Q06055 141 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 KLF5Q13887 457 aaPredicted RBP7.46□□□□□ -1.22
YBX3-212ENST00000542002 PYDC2Q56P42 97 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 Q8N402 240 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 ZFAND1Q8TCF1 268 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 SDHCQ99643 169 aaPredicted RBP7.46□□□□□ -1.22
YBX3-212ENST00000542002 MCRIP2Q9BUT9 160 aaKnown RBP7.46□□□□□ -1.22
YBX3-212ENST00000542002 PEF1Q9UBV8 284 aaKnown RBP7.46□□□□□ -1.22
YBX3-212ENST00000542002 ZNF257Q9Y2Q1 563 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 OR51B2Q9Y5P1 312 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 S4R3C0 116 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 IGLV11-55A0A075B6I3 123 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 A0A0G2JRQ6 117 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 FAM223BA6NKX1 122 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 DISC1C4P0D8 188 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 H0Y980 276 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 OVOL1O14753 267 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 IGHV3-23P01764 117 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 FGF2P09038 288 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 TRAPPC2P0DI81 140 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 TRAPPC2BP0DI82 140 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 BAK1Q16611 211 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 C15orf32Q32M92 178 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 Q6ZRM9 215 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 SLC25A42Q86VD7 318 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 FAM223AQ8IWN6 122 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 NECAP1Q8NC96 275 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 LHFPL5Q8TAF8 219 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 GLYATL2Q8WU03 294 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 TMEM230Q96A57 120 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 QTRT1Q9BXR0 403 aaKnown RBP7.45□□□□□ -1.22
YBX3-212ENST00000542002 COMMD5Q9GZQ3 224 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 RANGRFQ9HD47 186 aaPredicted RBP7.45□□□□□ -1.22
YBX3-212ENST00000542002 TMEM14BQ9NUH8 114 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 SLC2A8Q9NY64 477 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 COPZ2Q9P299 210 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 FBXL7Q9UJT9 491 aa7.45□□□□□ -1.22
YBX3-212ENST00000542002 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.44□□□□□ -1.22
YBX3-212ENST00000542002 TEX13DA0A0J9YY54 714 aaPredicted RBP7.44□□□□□ -1.22
YBX3-212ENST00000542002 PPP5D1E7EU14 171 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 BMPR1BO00238 502 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 HLA-AP01891 365 aaKnown RBP7.44□□□□□ -1.22
YBX3-212ENST00000542002 SERPINE2P07093 398 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 OR5AC1P0C628 307 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 OR13C7P0DN81 318 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 UCP1P25874 307 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 S100GP29377 79 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 S100A5P33763 92 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 ERVK-16P61578 105 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 EXOSC2Q13868 293 aaKnown RBP7.44□□□□□ -1.22
YBX3-212ENST00000542002 C9orf66Q5T8R8 295 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 ACSM6Q6P461 480 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 H2BFWTQ7Z2G1 175 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 HAPLN4Q86UW8 402 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 GDPD1Q8N9F7 314 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 OR1L8Q8NGR8 309 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 PRRT1Q99946 306 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 HINT2Q9BX68 163 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 SRRQ9GZT4 340 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 MCUBQ9NWR8 336 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 PRR13Q9NZ81 148 aa7.44□□□□□ -1.22
YBX3-212ENST00000542002 MFSD2BA6NFX1 497 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 CRYM-AS1A6NIL9 109 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 C15orf61A6NNL5 157 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 SNAPC5O75971 98 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 CDS2O95674 445 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 DEFA4P12838 97 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 ECI1P42126 302 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 SUPT4H1P63272 117 aaKnown RBP7.43□□□□□ -1.22
YBX3-212ENST00000542002 SURF2Q15527 256 aaPredicted RBP7.43□□□□□ -1.22
YBX3-212ENST00000542002 ADAMTSL5Q6ZMM2 481 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 REC114Q7Z4M0 266 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 SELENOHQ8IZQ5 122 aaKnown RBP7.43□□□□□ -1.22
YBX3-212ENST00000542002 MRAPQ8TCY5 172 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 SRSF8Q9BRL6 282 aaKnown RBP7.43□□□□□ -1.22
YBX3-212ENST00000542002 TMEM222Q9H0R3 208 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 NAA60Q9H7X0 242 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 NDUFA13Q9P0J0 144 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 PRNDQ9UKY0 176 aa7.43□□□□□ -1.22
YBX3-212ENST00000542002 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 IGHV3-21A0A0B4J1V1 117 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 A6NHS1 94 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 SAP30O75446 220 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 OR2C1O95371 312 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 CLEC3BP05452 202 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 CSN3P07498 182 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 EDN2P20800 178 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 HSPE1P61604 102 aaKnown RBP7.42□□□□□ -1.22
YBX3-212ENST00000542002 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 SPINK9Q5DT21 86 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 CLEC19AQ6UXS0 136 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 ZNF429Q86V71 674 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 TOMM5Q8N4H5 51 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 CCDC71LQ8N9Z2 235 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 OR5B3Q8NH48 314 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 OR4A16Q8NH70 328 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms