RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 LAMTOR2Q9Y2Q5 125 aa3.13□□□□□ -1.91
YBX3-210ENST00000540975 CARHSP1Q9Y2V2 147 aaKnown RBP3.13□□□□□ -1.91
YBX3-210ENST00000540975 PCYT1BQ9Y5K3 369 aaPredicted RBP3.13□□□□□ -1.91
YBX3-210ENST00000540975 OR51B2Q9Y5P1 312 aa3.13□□□□□ -1.91
YBX3-210ENST00000540975 SNX10Q9Y5X0 201 aa3.13□□□□□ -1.91
YBX3-210ENST00000540975 DOCK9Q9BZ29 2069 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 NHSQ6T4R5 1651 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TRAV36DV7A0A075B6V5 113 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 hCG_1818297A0A087WSY0 165 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TRAV19A0A0A6YYK7 116 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TRAV38-1A0A0B4J264 116 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 IGHV2OR16-5A0A0B4J2B6 119 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 LOC100130705A0A1B0GUX0 176 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TMEM269A0A1B0GVZ9 245 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 A0A1B0GX51 115 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TSPAN11A1L157 253 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 IFITM5A6NNB3 132 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 BBIP1A8MTZ0 92 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 E7EQ34 232 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 J3KT08 172 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 M0R233 179 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TNFRSF11BO00300 401 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CRXO43186 299 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 SLC37A4O43826 429 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 NRASP01111 189 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CT45A6P0DMU7 189 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CT45A5P0DMU8 189 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CT45A7P0DMV0 189 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 ZNF14P17017 642 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 ADCYAP1P18509 176 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TCN2P20062 427 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 USF1P22415 310 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 LOXP28300 417 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 RPL22P35268 128 aaKnown RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 HIST1H3AP68431 136 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 H3F3AP84243 136 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 HIST1H1AQ02539 215 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 GINS1Q14691 196 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 JOSD1Q15040 202 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 CT45A1Q5HYN5 189 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 KPRPQ5T749 579 aaPredicted RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 TEX36Q5VZQ5 186 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 Q5W150 140 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 SFXN4Q6P4A7 337 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TRIM40Q6P9F5 258 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 ARL9Q6T311 187 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 HIST2H3AQ71DI3 136 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CBLN2Q8IUK8 224 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 FAM24BQ8N5W8 94 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TCTEX1D1Q8N7M0 179 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 WDR31Q8NA23 367 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 OR5A2Q8NGI9 324 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 OR10D4PQ8NGN7 298 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 OR1S2Q8NGQ3 325 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 OR5K2Q8NHB8 316 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CT45A3Q8NHU0 189 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 CLDN23Q96B33 292 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 RNF157Q96PX1 679 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TRIB3Q96RU7 358 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 GABRG3Q99928 467 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 MRPL57Q9BQC6 102 aaKnown RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 CWH43Q9H720 699 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 POPDC3Q9HBV1 291 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 HRASLS2Q9NWW9 162 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 SPANXCQ9NY87 97 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 MRPL27Q9P0M9 148 aaKnown RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 SLC23A2Q9UGH3 650 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 NAT8Q9UHE5 227 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 LSM7Q9UK45 103 aaKnown RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 COQ4Q9Y3A0 265 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 TPRKBQ9Y3C4 175 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 LSM5Q9Y4Y9 91 aaKnown RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 QSER1Q2KHR3 1735 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 OTOFQ9HC10 1997 aa3.12□□□□□ -1.91
YBX3-210ENST00000540975 COL14A1Q05707 1796 aaKnown RBP3.12□□□□□ -1.91
YBX3-210ENST00000540975 PHLPP1O60346 1717 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.11□□□□□ -1.91
YBX3-210ENST00000540975 SPAARA0A1B0GVQ0 90 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 INMT-MINDY4F8WBC2 141 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 LYRM1O43325 122 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 SNAPC5O75971 98 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 MT-ND4LP03901 98 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 DBIP07108 87 aaKnown RBP3.11□□□□□ -1.91
YBX3-210ENST00000540975 PFN1P07737 140 aaKnown RBP3.11□□□□□ -1.91
YBX3-210ENST00000540975 RPL7P18124 248 aaKnown RBP3.11□□□□□ -1.91
YBX3-210ENST00000540975 GGT1P19440 569 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 CXCL2P19875 107 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 PRTN3P24158 256 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 MIPP30301 263 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 SRIP30626 198 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 HRH1P35367 487 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 GPR6P46095 362 aaPredicted RBP3.11□□□□□ -1.91
YBX3-210ENST00000540975 OR1E2P47887 323 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 REG1BP48304 166 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 GZMMP51124 257 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 S100A10P60903 97 aa3.11□□□□□ -1.91
YBX3-210ENST00000540975 HSPE1P61604 102 aaKnown RBP3.11□□□□□ -1.91
YBX3-210ENST00000540975 RPS28P62857 69 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms