RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	DEGS1	O15121	323 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CRISP2	P16562	243 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	KITLG	P21583	273 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CDC34	P49427	236 aa	Predicted RBP	4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RAB7A	P51149	207 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GTF3C1	Q12789	2109 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	EFNB3	Q15768	340 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HLA-DRB5	Q30154	266 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ATOH7	Q8N100	152 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DRAM1	Q8N682	238 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DEFB108B	Q8NET1	73 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR10P1	Q8NGE3	313 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	BTF3L4	Q96K17	158 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C1QTNF5	Q9BXJ0	243 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	JKAMP	Q9P055	326 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	USP24	Q9UPU5	2620 aa		4.7	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		M0QZK8	103 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IGHV3-13	P01766	116 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TFF1	P04155	84 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SLC25A6	P12236	298 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IER3	P46695	156 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CEBPD	P49716	269 aa	Predicted RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TPPP2	P59282	170 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RPL30	P62888	115 aa	Known RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MSMO1	Q15800	293 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MBNL2	Q5VZF2	373 aa	Known RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMEM14EP	Q6UXP3	125 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q6ZS49	121 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SEM1	Q6ZVN7	128 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LSM10	Q969L4	123 aa	Known RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SFRP2	Q96HF1	295 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	NPCDR1	Q9BY65	106 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PPP1R14D	Q9NXH3	145 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PRRC2C	Q9Y520	2896 aa	Known RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DOCK10	Q96BY6	2186 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MDFIC2	A0A1B0GVS7	189 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SCO2	A0A1W2PP80	73 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		F6UZH7	168 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	YPEL1	O60688	119 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LCN2	P80188	198 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ASPHD1	Q5U4P2	390 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TRAT1	Q6PIZ9	186 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MOGAT3	Q86VF5	341 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OCC1	Q8TAD7	63 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CIB3	Q96Q77	187 aa	Predicted RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	YPEL2	Q96QA6	119 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMEM147	Q9BVK8	224 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MRPL18	Q9H0U6	180 aa	Known RBP	4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CHODL	Q9H9P2	273 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FBXL7	Q9UJT9	491 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		A0A1W2PPV4	95 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ODAM	A1E959	279 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IQCF6	A8MYZ5	107 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FCN1	O00602	326 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MLNR	O43193	412 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SPINT2	O43291	252 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	S1PR2	O95136	353 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IGLV1-44	P01699	117 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CCL8	P80075	99 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMEM183B	Q1AE95	376 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CEACAM21	Q3KPI0	293 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PRR31	Q5SQ13	230 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ERAS	Q7Z444	233 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMEM144	Q7Z5S9	345 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM58A	Q8N1B3	248 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	STPG4	Q8N801	248 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR5AU1	Q8NGC0	362 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ITLN1	Q8WWA0	313 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR2V2	Q96R30	315 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PKIB	Q9C010	78 aa		4.69	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	hADV38S2	A0JD32	116 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IL6R	P08887	468 aa	Predicted RBP	4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PMCH	P20382	165 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GUSBP1	Q15486	140 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LTC4S	Q16873	150 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RNASE8	Q8TDE3	154 aa	Known RBP	4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	WNT10A	Q9GZT5	417 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C17orf98	A8MV24	154 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DEFB108A	A8MXU0	73 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	VENTX	O95231	258 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TCL1A	P56279	114 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	KRTAP27-1	Q3LI81	207 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TEX43	Q6ZNM6	134 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LRRC75A-AS1	Q8N1F1	130 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR52L2P	Q8NGH6	319 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR10G8	Q8NGN5	311 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR1L6	Q8NGR2	347 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR2D2	Q9H210	308 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LIN7C	Q9NUP9	197 aa	Known RBP	4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	EXPH5	Q8NEV8	1989 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TRGV10	A0A0A0MS01	117 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IGHV3-43	A0A0B4J1X8	118 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A10P	A6NDY2	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A18P	A6NE21	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A16P	A6NEW6	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A20P	A6NIJ5	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A8P	A6NJQ4	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A7P	A6NKC0	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A22P	A8MWA6	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A12P	A8MX19	464 aa		4.68	□□□□□ -1.66

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