RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 A0A1W2PQD3 144 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 OR4C46A6NHA9 309 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 RFPL4AA6NLU0 287 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 RFPL4AL1F8VTS6 287 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 INMT-MINDY4F8WBC2 141 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 H3BT86 120 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 LST1O00453 97 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 KPNA3O00505 521 aaPredicted RBP0.74□□□□□ -2.29
MDM2-227ENST00000540709 BHLHE40O14503 412 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 PLA2G10O15496 165 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 SULT1B1O43704 296 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 CHP2O43745 196 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 KLRC4O43908 158 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 HLA-DRB1P01911 266 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 BPGMP07738 259 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 TFPTP0C1Z6 253 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 OR5G3P0C626 314 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 CCL3P10147 92 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 HSD11B1P28845 292 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 ALDH3A1P30838 453 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 DEFA3P59666 94 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 RAB5BP61020 215 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 TMEM258P61165 79 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 POLR2GP62487 172 aaKnown RBP eCLIP0.74□□□□□ -2.29
MDM2-227ENST00000540709 RANP62826 216 aaKnown RBP0.74□□□□□ -2.29
MDM2-227ENST00000540709 HBA1P69905 142 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 CCL7P80098 99 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 IFITM2Q01629 132 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 GLO1Q04760 184 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 AKR1C1Q04828 323 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 EDDM3AQ14507 147 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 TAF1AQ15573 450 aaPredicted RBP0.74□□□□□ -2.29
MDM2-227ENST00000540709 GUK1Q16774 197 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 ACOT6Q3I5F7 207 aaPredicted RBP0.74□□□□□ -2.29
MDM2-227ENST00000540709 TNFAIP8L3Q5GJ75 292 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 SYPL2Q5VXT5 272 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 BPIFA4PQ86YQ2 179 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 KRT222Q8N1A0 295 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 LRRC25Q8N386 305 aaPredicted RBP0.74□□□□□ -2.29
MDM2-227ENST00000540709 DEFB125Q8N687 156 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 SGMS2Q8NHU3 365 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 MCFD2Q8NI22 146 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 DNAJC9Q8WXX5 260 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 RNASE6Q93091 150 aaKnown RBP0.74□□□□□ -2.29
MDM2-227ENST00000540709 BORCS7Q96B45 105 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 ROPN1LQ96C74 230 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 CCDC90BQ9GZT6 254 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 PRTFDC1Q9NRG1 225 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 UQCC1Q9NVA1 299 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 ZFYVE9O95405 1425 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 TRAV9-1A0A075B6T8 112 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 A0A087WUJ7 227 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 TRGV5A0A0B4J1U4 118 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 A0A0J9YY10 115 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 A0A1B0GW54 56 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 A0A1B0GX78 115 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 SMIM9A6NGZ8 99 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 A8MUN3 132 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 FAAHO00519 579 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 PIRO00625 290 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 PDE6DO43924 150 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 NOS1APO75052 506 aaPredicted RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 NDUFB2O95178 105 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 NSA2O95478 260 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 PRM2P04554 102 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 SRP19P09132 144 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 CTXN2P0C2S0 81 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 MSNP26038 577 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 HLA-DMBP28068 263 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 CA5AP35218 305 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 RPL5P46777 297 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 XCL1P47992 114 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 RBM11P57052 281 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 SNRPD2P62316 118 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 TMEM97Q5BJF2 176 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 C9orf64Q5T6V5 341 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 HACD4Q5VWC8 232 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 LPCAT3Q6P1A2 487 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 ALKAL1Q6UXT8 129 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 SSX8Q7RTT4 187 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 LRRC28Q86X40 367 aaPredicted RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 OR6V1Q8N148 313 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 TMEM86BQ8N661 226 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 OR51T1Q8NGJ9 327 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 ZNF675Q8TD23 568 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 SPACA4Q8TDM5 124 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 IMMP2LQ96T52 175 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 GINS4Q9BRT9 223 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 C9orf16Q9BUW7 83 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 TMEM147Q9BVK8 224 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 WDR61Q9GZS3 305 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 RNASE7Q9H1E1 156 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 DCSTAMPQ9H295 470 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 C11orf68Q9H3H3 251 aaKnown RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 EFCAB1Q9HAE3 211 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 NMNAT1Q9HAN9 279 aaPredicted RBP0.73□□□□□ -2.29
MDM2-227ENST00000540709 C14orf105Q9NVL8 296 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 OPTCQ9UBM4 332 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 STOML2Q9UJZ1 356 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 FUT9Q9Y231 359 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms