RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 KLK9Q2XQG4 91 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 Q8N402 240 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 OR6Q1Q8NGQ2 317 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 OR1L8Q8NGR8 309 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 C5orf66Q9H5L9 145 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 NDUFA4L2Q9NRX3 87 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 COPZ2Q9P299 210 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 PEF1Q9UBV8 284 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 FBXL7Q9UJT9 491 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 KLK9Q9UKQ9 250 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 OR51B2Q9Y5P1 312 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 K7EIL1 84 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 SNAPC5O75971 98 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 IGKV1-5P01602 117 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 TRAPPC2P0DI81 140 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 TRAPPC2BP0DI82 140 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 WT1-ASQ06250 92 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 C15orf32Q32M92 178 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 CCDC71LQ8N9Z2 235 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 PRRT1Q99946 306 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 TMEM14BQ9NUH8 114 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 SLC2A8Q9NY64 477 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 S4R3C0 116 aa14.03□□□□□ -0.16
SNRPA1-203ENST00000540017 IGLV11-55A0A075B6I3 123 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 C15orf61A6NNL5 157 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 P0C879 139 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 ETV6P41212 452 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 ECI1P42126 302 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 KLF5Q13887 457 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 SURF2Q15527 256 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 ACSM6Q6P461 480 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 H2BFWTQ7Z2G1 175 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 MRAPQ8TCY5 172 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 SRSF8Q9BRL6 282 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 HINT2Q9BX68 163 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 MCUBQ9NWR8 336 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 PRNDQ9UKY0 176 aa14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 C14orf166Q9Y224 244 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-203ENST00000540017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 BMPR1BO00238 502 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 IGHV3-23P01764 117 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 OR13C7P0DN81 318 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 ZP3P21754 424 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 UCP1P25874 307 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 GDPD1Q8N9F7 314 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 TSC22D3Q99576 134 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 SRRQ9GZT4 340 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 NDUFA13Q9P0J0 144 aa14.01□□□□□ -0.17
SNRPA1-203ENST00000540017 A0A0G2JRQ6 117 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 SAP30O75446 220 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 DHFRP00374 187 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 OR5AC1P0C628 307 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 DEFA4P12838 97 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 MFAP2P55001 183 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 SPANXN2Q5MJ10 180 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 OR5B3Q8NH48 314 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 LHFPL5Q8TAF8 219 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 GLYATL2Q8WU03 294 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 TMEM230Q96A57 120 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 CCDC140Q96MF4 163 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 TMEM222Q9H0R3 208 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 NAA60Q9H7X0 242 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 SCP2D1Q9UJQ7 156 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 TGP01266 2768 aa14□□□□□ -0.17
SNRPA1-203ENST00000540017 A0A0B4J293 547 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 TEX13DA0A0J9YY54 714 aaPredicted RBP13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 MFSD2BA6NFX1 497 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 CRYM-AS1A6NIL9 109 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 PPP5D1E7EU14 171 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 HIST1H1BP16401 226 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 INSL3P51460 131 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 SYNJ2BPP57105 145 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 TRIM16LQ309B1 348 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 THOC7Q6I9Y2 204 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 IL34Q6ZMJ4 242 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 TOMM5Q8N4H5 51 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 LSM10Q969L4 123 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 FKBP11Q9NYL4 201 aa13.99□□□□□ -0.17
SNRPA1-203ENST00000540017 CDS2O95674 445 aa13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 HLA-AP01891 365 aaKnown RBP13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 BAK1Q16611 211 aa13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 ZNF429Q86V71 674 aa13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 PRR25Q96S07 402 aa13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 SDHCQ99643 169 aaPredicted RBP13.98□□□□□ -0.17
SNRPA1-203ENST00000540017 B3GALNT1O75752 331 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 AKR1C2P52895 323 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 AP3S2P59780 193 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 HSPE1P61604 102 aaKnown RBP13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 RPEL1Q2QD12 228 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 CLEC19AQ6UXS0 136 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 Q6ZRM9 215 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 HAPLN4Q86UW8 402 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 PRR13Q9NZ81 148 aa13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 F11RQ9Y624 299 aaKnown RBP13.97□□□□□ -0.17
SNRPA1-203ENST00000540017 FAUP35544 74 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 MECP2P51608 486 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 PRCDQ00LT1 54 aa13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 SPINK9Q5DT21 86 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms