RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 A6NDX4 124 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 LY86O95711 162 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 VDAC2P45880 294 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-204ENST00000539721 COMPP49747 757 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-204ENST00000539721 ZNF345Q14585 488 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 SPANXN5Q5MJ07 72 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 OTOGQ6ZRI0 2925 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 ACANP16112 2415 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 A0A0D9SG52 128 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 E7EUB6 86 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 TSC22D2O75157 780 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 CNIH1O95406 144 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 LY6G6DO95868 133 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 CD99P14209 185 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 TMUB2Q71RG4 321 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 ZNF48Q96MX3 618 aaPredicted RBP12.85□□□□□ -0.35
TRAF3-204ENST00000539721 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
TRAF3-204ENST00000539721 A0A1W2PN81 502 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 IGSF23A1L1A6 192 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 CHRNA7P36544 502 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 IER3P46695 156 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 TMEM267Q0VDI3 215 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-204ENST00000539721 Q6YL49 198 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 SRSF12Q8WXF0 261 aaKnown RBP12.84□□□□□ -0.35
TRAF3-204ENST00000539721 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 PAIP2BQ9ULR5 123 aaKnown RBP12.84□□□□□ -0.35
TRAF3-204ENST00000539721 STRAPQ9Y3F4 350 aaKnown RBP12.84□□□□□ -0.35
TRAF3-204ENST00000539721 TLN2Q9Y4G6 2542 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 PLXNB1O43157 2135 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 BTBD17A6NE02 478 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 S100A11P31949 105 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 SSBP2P81877 361 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-204ENST00000539721 EWSR1Q01844 656 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAF3-204ENST00000539721 FXYD3Q14802 87 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 CLEC9AQ6UXN8 241 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 C5orf56Q8N8D9 126 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 OR5R1Q8NH85 324 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
TRAF3-204ENST00000539721 A0A1B0GW64 132 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 FGF16O43320 207 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 IFNA10P01566 189 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 HLA-DRB1P01911 266 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 FOSL1P15407 271 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 C4BPBP20851 252 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 RPP30P78346 268 aaKnown RBP12.83□□□□□ -0.36
TRAF3-204ENST00000539721 NHLH2Q02577 135 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 STX12Q86Y82 276 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 PRDM13Q9H4Q3 707 aa12.83□□□□□ -0.36
TRAF3-204ENST00000539721 CST7O76096 145 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 METTL15P1P0C7V9 234 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 CX3CL1P78423 397 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
TRAF3-204ENST00000539721 OPCMLQ14982 345 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 ZNF562Q6V9R5 426 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 MRPL41Q8IXM3 137 aaKnown RBP12.82□□□□□ -0.36
TRAF3-204ENST00000539721 SIGLECL1Q8N7X8 197 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 TNFRSF19Q9NS68 423 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 U3KQ87 197 aa12.82□□□□□ -0.36
TRAF3-204ENST00000539721 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 INS-IGF2F8WCM5 200 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 SULT1A1P50225 295 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 BAXQ07812 192 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 TMEM14EPQ6UXP3 125 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 SLC24A4Q8NFF2 622 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 ABHD5Q8WTS1 349 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 SSMEM1Q8WWF3 244 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 ARPC1AQ92747 370 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 IGHV7-81A0A0B4J1V7 117 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 SH2D7A6NKC9 451 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-204ENST00000539721 C15orf62A8K5M9 175 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 TEX22C9J3V5 150 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-204ENST00000539721 BCL2L11O43521 198 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 APELAP0DMC3 54 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 OR13C7P0DN81 318 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 NPY1RP25929 384 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 SNCAP37840 140 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 WT1-ASQ06250 92 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 BSCL2Q96G97 398 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-204ENST00000539721 ARPC5LQ9BPX5 153 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 SMIM3Q9BZL3 60 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 FBXL17Q9UF56 701 aa12.81□□□□□ -0.36
TRAF3-204ENST00000539721 IGLC7A0M8Q6 106 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 M0QZK8 103 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 OR8U8P0C7N1 319 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 HTR2BP41595 481 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 HSD17B13Q7Z5P4 300 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-204ENST00000539721 TMEM217Q8N7C4 229 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 FAM103A1Q9BTL3 118 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms