RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 K7EN84 100 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 SPINK4O60575 86 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 STAG3L2P0CL84 134 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 STAG3L3P0CL85 134 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 OPRK1P41145 380 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 TCTEX1D1Q8N7M0 179 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-210ENST00000539599 OR10J4P0C629 311 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 GZMBP10144 247 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 TIMP3P35625 211 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 RBMXL3Q8N7X1 1067 aaKnown RBP11.5□□□□□ -0.57
UBE3B-210ENST00000539599 PPP1R35Q8TAP8 253 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 RNF7Q9UBF6 113 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 RPL31P62899 125 aaKnown RBP11.5□□□□□ -0.57
UBE3B-210ENST00000539599 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 STUMQ69YW2 141 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
UBE3B-210ENST00000539599 SSBP2P81877 361 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-210ENST00000539599 C10orf55Q5SWW7 151 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 C14orf144Q96I85 54 aa11.5□□□□□ -0.57
UBE3B-210ENST00000539599 ZFHX3Q15911 3703 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 F6UZH7 168 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 GGCTO75223 188 aaKnown RBP11.49□□□□□ -0.57
UBE3B-210ENST00000539599 GCHFRP30047 84 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 LGALS4P56470 323 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 CR1LQ2VPA4 569 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 AARDQ4LEZ3 155 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 PRR31Q5SQ13 230 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 C1orf185Q5T7R7 199 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 OR9G1Q8NH87 305 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 ABCA4P78363 2273 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 IGLV3-9A0A075B6K5 115 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 KLK10O43240 276 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 APELAP0DMC3 54 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 CD40P25942 277 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
UBE3B-210ENST00000539599 SLC35B1P78383 322 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 TEPPQ6URK8 271 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 ZNF439Q8NDP4 499 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
UBE3B-210ENST00000539599 J3QR06 171 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 CBLN1P23435 193 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 CHRNB4P30926 498 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 DEFA6Q01524 100 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 PAX5Q02548 391 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 ANAPC16Q96DE5 110 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 PDE6DO43924 150 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
UBE3B-210ENST00000539599 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 TRAPPC1Q9Y5R8 145 aa11.48□□□□□ -0.57
UBE3B-210ENST00000539599 TRAV5A0A0B4J249 113 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 F2Z2F3 143 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 CEACAM4O75871 244 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 CXorf1O96002 111 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 OR4A8P0C604 315 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-210ENST00000539599 CFHR2P36980 270 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 MZT1Q08AG7 82 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 PSG5Q15238 335 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 SLC35D1Q9NTN3 355 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 LINC00869P0C866 280 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 RPL15P61313 204 aaKnown RBP11.47□□□□□ -0.57
UBE3B-210ENST00000539599 RPP30P78346 268 aaKnown RBP11.47□□□□□ -0.57
UBE3B-210ENST00000539599 LYPD2Q6UXB3 125 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 ZNF664Q8N3J9 261 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 OR2T6Q8NHC8 308 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 RAB1CQ92928 201 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 ATRXP46100 2492 aa11.47□□□□□ -0.57
UBE3B-210ENST00000539599 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 VENTXO95231 258 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 PRB4P10163 310 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-210ENST00000539599 CRYBB3P26998 211 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 OR10J1P30954 320 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 ADMP35318 185 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 FXYD3Q14802 87 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 ZNF788Q6ZQV5 615 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 DOLPP1Q86YN1 238 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
UBE3B-210ENST00000539599 ZNF503Q96F45 646 aa11.46□□□□□ -0.57
UBE3B-210ENST00000539599 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 A8MXE2 369 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 RUSC1-AS1Q66K80 236 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 TEX38Q6PEX7 206 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 MRPL41Q8IXM3 137 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms