RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SLC25A33Q9BSK2 321 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 MAGT1Q9H0U3 335 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 TNFSF18Q9UNG2 199 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 OTOGQ6ZRI0 2925 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 TSC22D2O75157 780 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 CA2P00918 260 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 HLA-DRB1P01911 266 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 NUP62P37198 522 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 VDAC2P45880 294 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 RPL27AP46776 148 aaKnown RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 HOXA1P49639 335 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 PJVKQ0ZLH3 352 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 ZNF345Q14585 488 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 CLEC9AQ6UXN8 241 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 HSD17B13Q7Z5P4 300 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 C5orf56Q8N8D9 126 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 INO80EQ8NBZ0 244 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 ZNF48Q96MX3 618 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 SMR3AQ99954 134 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 SRSF8Q9BRL6 282 aaKnown RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 HIPK2Q9H2X6 1198 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 PLEKHA3Q9HB20 300 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 ENY2Q9NPA8 101 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 NDUFA4L2Q9NRX3 87 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 LYRM2Q9NU23 88 aaPredicted RBP8.47□□□□□ -1.05
LEMD3-202ENST00000539442 CDC42EP3Q9UKI2 254 aa8.47□□□□□ -1.05
LEMD3-202ENST00000539442 NAV3Q8IVL0 2385 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 ARPC5O15511 151 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 SCAF4O95104 1147 aaKnown RBP8.46□□□□□ -1.06
LEMD3-202ENST00000539442 IGHV4-59P01825 116 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 IAPPP10997 89 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 MYOD1P15172 320 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 PAX9P55771 341 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 ATP5IP56385 69 aaPredicted RBP8.46□□□□□ -1.06
LEMD3-202ENST00000539442 RPP30P78346 268 aaKnown RBP8.46□□□□□ -1.06
LEMD3-202ENST00000539442 OR2F1Q13607 317 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 ACOT7LQ6ZUV0 252 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM219Q86XT9 240 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 OR2C3Q8N628 320 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 GRPEL2Q8TAA5 225 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 SRSF12Q8WXF0 261 aaKnown RBP8.46□□□□□ -1.06
LEMD3-202ENST00000539442 AQP10Q96PS8 301 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 MFFQ9GZY8 342 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 SLC25A31Q9H0C2 315 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 PSENENQ9NZ42 101 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 VPREB3Q9UKI3 123 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 U3KQ87 197 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.06
LEMD3-202ENST00000539442 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 A0A0D9SG52 128 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 RNF222A6NCQ9 220 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 FCN1O00602 326 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 CNIH1O95406 144 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM50AO95807 157 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 OPN1MWP04001 364 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 OPN1MW2P0DN77 364 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 OPN1MW3P0DN78 364 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 C4BPBP20851 252 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 RPL12P30050 165 aaKnown RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 CAV2P51636 162 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 GNB1P62873 340 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 CX3CL1P78423 397 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 SSBP2P81877 361 aaPredicted RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 ERHP84090 104 aaKnown RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 BAXQ07812 192 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 FXYD3Q14802 87 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 LY6EQ16553 131 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 SPINK9Q5DT21 86 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 C10orf55Q5SWW7 151 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 RBMS3Q6XE24 437 aaKnown RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 ARPC1AQ92747 370 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 HINT2Q9BX68 163 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 HEYLQ9NQ87 328 aaPredicted RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 STRAPQ9Y3F4 350 aaKnown RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 ACANP16112 2415 aa8.45□□□□□ -1.06
LEMD3-202ENST00000539442 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
LEMD3-202ENST00000539442 TLN2Q9Y4G6 2542 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 A0A1B0GW64 132 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 IGLC7A0M8Q6 106 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 CGB1A6NKQ9 187 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 HOXA3O43365 443 aaPredicted RBP8.44□□□□□ -1.06
LEMD3-202ENST00000539442 HKR1P10072 659 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 SRD5A1P18405 259 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 HTR2BP41595 481 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 NKX2-5P52952 324 aaPredicted RBP8.44□□□□□ -1.06
LEMD3-202ENST00000539442 BSXQ3C1V8 233 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 STX12Q86Y82 276 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 KCNRGQ8N5I3 272 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM252Q8N6L7 170 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 SIGLECL1Q8N7X8 197 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 SLC24A4Q8NFF2 622 aa8.44□□□□□ -1.06
LEMD3-202ENST00000539442 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 FAM24AA6NFZ4 105 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms