RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SDHCQ99643 169 aaPredicted RBP10.51□□□□□ -0.73
CD9-208ENST00000538834 PRRT1Q99946 306 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 QTRT1Q9BXR0 403 aaKnown RBP10.51□□□□□ -0.73
CD9-208ENST00000538834 SRRQ9GZT4 340 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 RANGRFQ9HD47 186 aaPredicted RBP10.51□□□□□ -0.73
CD9-208ENST00000538834 HRASLSQ9HDD0 168 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 C3orf85A0A1B0GTC6 90 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 C13orf42A0A1B0GVH6 325 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 C15orf61A6NNL5 157 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 DISC1C4P0D8 188 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 K7EIL1 84 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 OVOL1O14753 267 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 CDS2O95674 445 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 PRB2P02812 416 aaPredicted RBP10.5□□□□□ -0.73
CD9-208ENST00000538834 PPP5CP53041 499 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 DEFA5Q01523 94 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 HSD17B13Q7Z5P4 300 aaPredicted RBP10.5□□□□□ -0.73
CD9-208ENST00000538834 ZNF429Q86V71 674 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 OR10W1Q8NGF6 305 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 OR5B3Q8NH48 314 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 DPF1Q92782 380 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 TMEM230Q96A57 120 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 TSC22D3Q99576 134 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 ZNF355PQ9NSJ1 428 aa10.5□□□□□ -0.73
CD9-208ENST00000538834 PEF1Q9UBV8 284 aaKnown RBP10.5□□□□□ -0.73
CD9-208ENST00000538834 CRYM-AS1A6NIL9 109 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 NDUFB8O95169 186 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 SERPINE2P07093 398 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 TRAPPC2P0DI81 140 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 TRAPPC2BP0DI82 140 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 PGAM2P15259 253 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 HOXD3P31249 432 aaPredicted RBP10.49□□□□□ -0.73
CD9-208ENST00000538834 MECP2P51608 486 aaKnown RBP10.49□□□□□ -0.73
CD9-208ENST00000538834 MFAP2P55001 183 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 ERVK-16P61578 105 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 SCGB2B2Q4G0G5 96 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 Q8N402 240 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 LHFPL5Q8TAF8 219 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 GALNT14Q96FL9 552 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 CCDC140Q96MF4 163 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 COMMD5Q9GZQ3 224 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 PRNDQ9UKY0 176 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 NSG2Q9Y328 171 aa10.49□□□□□ -0.73
CD9-208ENST00000538834 A0A0B4J293 547 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 WI2-2373I1.2A0A1W2PRP0 233 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 SEC14L6B5MCN3 397 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 BMPR1BO00238 502 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 HIST1H1BP16401 226 aaKnown RBP10.48□□□□□ -0.73
CD9-208ENST00000538834 ZP3P21754 424 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 S100A5P33763 92 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 ATP5G2Q06055 141 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 C15orf32Q32M92 178 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 FAM209BQ5JX69 171 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 PVRIGQ6DKI7 326 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
CD9-208ENST00000538834 A0A0G2JRQ6 117 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 A6NHS1 94 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 OR2J3O76001 311 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 RAB25P57735 213 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 HSPE1P61604 102 aaKnown RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 SUPT4H1P63272 117 aaKnown RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 SP6Q3SY56 376 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 Q6ZRM9 215 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 ZNF114Q8NC26 417 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 LSM10Q969L4 123 aaKnown RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 TMEM56Q96MV1 263 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 NAA60Q9H7X0 242 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 COPZ2Q9P299 210 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 SCP2D1Q9UJQ7 156 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 FBXL7Q9UJT9 491 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 LSM4Q9Y4Z0 139 aaKnown RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 F11RQ9Y624 299 aaKnown RBP10.47□□□□□ -0.73
CD9-208ENST00000538834 TMEM56-RWDD3S4R434 201 aa10.47□□□□□ -0.73
CD9-208ENST00000538834 ANKRD34BA5PLL1 514 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 SNAPC5O75971 98 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 DHFRP00374 187 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 REG1AP05451 166 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 OR5AC1P0C628 307 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 PRCDQ00LT1 54 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 DHODHQ02127 395 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 TMEM187Q14656 261 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 BAK1Q16611 211 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 IZUMO4Q1ZYL8 232 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 PYDC2Q56P42 97 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 LINC00299Q6ZSB3 139 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 H2BFWTQ7Z2G1 175 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 SELENOHQ8IZQ5 122 aaKnown RBP10.46□□□□□ -0.73
CD9-208ENST00000538834 OR2C3Q8N628 320 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 ZNF502Q8TBZ5 544 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 ZNF414Q96IQ9 312 aa10.46□□□□□ -0.73
CD9-208ENST00000538834 ZMAT5Q9UDW3 170 aaKnown RBP10.46□□□□□ -0.73
CD9-208ENST00000538834 F8W735 103 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms