RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TMEM252Q8N6L7 170 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 SMIM8Q96KF7 97 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 AIFM2Q9BRQ8 373 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 SMIM3Q9BZL3 60 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 PSENENQ9NZ42 101 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
CLN6-202ENST00000538696 IFNA17P01571 189 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 SPCS3P61009 180 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
CLN6-202ENST00000538696 MMDQ15546 238 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 VMA21Q3ZAQ7 101 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 SLC51BQ86UW2 128 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 ZNF429Q86V71 674 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 OR8H1Q8NGG4 311 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 OR52E5Q8NH55 327 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 TMEM167AQ8TBQ9 72 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 DTD1Q8TEA8 209 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 RNF5Q99942 180 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
CLN6-202ENST00000538696 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 TMEM14BQ9NUH8 114 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 PRNDQ9UKY0 176 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 OR51B2Q9Y5P1 312 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 WSB1Q9Y6I7 421 aa13.68□□□□□ -0.22
CLN6-202ENST00000538696 NBR2O15453 112 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 SLC25A17O43808 307 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 NDUFA3O95167 84 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 LGALS7P47929 136 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 TAS2R30P59541 319 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 NHLH2Q02577 135 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 PSG5Q15238 335 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 PDLIM3Q53GG5 364 aaPredicted RBP13.67□□□□□ -0.22
CLN6-202ENST00000538696 PRIMA1Q86XR5 153 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 Q8N9W7 124 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 NPBQ8NG41 125 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 OR4A5Q8NH83 315 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 OR4C12Q96R67 309 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 SLC25A31Q9H0C2 315 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 WFDC1Q9HC57 220 aa13.67□□□□□ -0.22
CLN6-202ENST00000538696 CST7O76096 145 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 SPDEFO95238 335 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 CRYGBP07316 175 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 VDAC2P45880 294 aaPredicted RBP13.66□□□□□ -0.22
CLN6-202ENST00000538696 HSPE1P61604 102 aaKnown RBP13.66□□□□□ -0.22
CLN6-202ENST00000538696 MRGPRG-AS1Q2M3A8 158 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 TEX261Q6UWH6 196 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 C5orf56Q8N8D9 126 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 VSTM2AQ8TAG5 236 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 ST8SIA2Q92186 375 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 TSNAXQ99598 290 aaKnown RBP13.66□□□□□ -0.22
CLN6-202ENST00000538696 U3KQ87 197 aa13.66□□□□□ -0.22
CLN6-202ENST00000538696 FAM181BA6NEQ2 426 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 SH2D7A6NKC9 451 aaPredicted RBP13.65□□□□□ -0.22
CLN6-202ENST00000538696 NCBP2LA6PVI3 153 aaKnown RBP13.65□□□□□ -0.22
CLN6-202ENST00000538696 TRIM77I1YAP6 450 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 RRHO14718 337 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 FGF16O43320 207 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 AMY1AP04745 511 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 TEX45Q8NA69 505 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 ZNF680Q8NEM1 530 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 CIB3Q96Q77 187 aaPredicted RBP13.65□□□□□ -0.22
CLN6-202ENST00000538696 FBXL15Q9H469 300 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
CLN6-202ENST00000538696 C1RLQ9NZP8 487 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 PLXNB1O43157 2135 aa13.65□□□□□ -0.22
CLN6-202ENST00000538696 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 TAAR5O14804 337 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 OPN1MWP04001 364 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 METTL15P1P0C7V9 234 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 OPN1MW2P0DN77 364 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 OPN1MW3P0DN78 364 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
CLN6-202ENST00000538696 RPL8P62917 257 aaKnown RBP13.64□□□□□ -0.23
CLN6-202ENST00000538696 BAXQ07812 192 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
CLN6-202ENST00000538696 C5orf64Q2M2E5 130 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
CLN6-202ENST00000538696 TMEM14EPQ6UXP3 125 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 HINT2Q9BX68 163 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 KIAA1456Q9P272 454 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 METTL1Q9UBP6 276 aaKnown RBP13.64□□□□□ -0.23
CLN6-202ENST00000538696 ZNF257Q9Y2Q1 563 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 JMJD1CQ15652 2540 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 M0QZK8 103 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 FGF2P09038 288 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 SULT1A1P50225 295 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 PRCDQ00LT1 54 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 PJVKQ0ZLH3 352 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 C10orf55Q5SWW7 151 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 ZNF767PQ75MW2 155 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 STX12Q86Y82 276 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 TMEM217Q8N7C4 229 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 STOML3Q8TAV4 291 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 TAF15Q92804 592 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLN6-202ENST00000538696 CLCC1Q96S66 551 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms