RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 A0A0B4J293 547 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 TMEM178BH3BS89 294 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SAP30O75446 220 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 HNRNPA3P51991 378 aaKnown RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 UCP3P55916 312 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 LINC01356Q8N9X3 169 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SRSF12Q8WXF0 261 aaKnown RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 SMIM8Q96KF7 97 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 BPESC1Q9GZL8 116 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 TRAV34A0A0B4J273 112 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 PSMB11A5LHX3 300 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 OR4C46A6NHA9 309 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 IGFBP2P18065 325 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CD33P20138 364 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CRYBB3P26998 211 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 PSMB2P49721 201 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 MORN2Q502X0 79 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 NCMAPQ5T1S8 102 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF474Q6S9Z5 364 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF497Q6ZNH5 498 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 FAM131CQ96AQ9 280 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ALX4Q9H161 411 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 TUBD1Q9UJT1 453 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 RRHO14718 337 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 BCL2P10415 239 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CD99P14209 185 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 GAS1P54826 345 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF385CQ66K41 422 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 WFDC12Q8WWY7 111 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF319Q9P2F9 582 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 IGHV2-26A0A0B4J1V2 119 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 PHOX2AO14813 284 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CEACAM4O75871 244 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CXCL2P19875 107 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CKS2P33552 79 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 RPL29P47914 159 aaKnown RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 C3orf56Q8N813 242 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 TEX45Q8NA69 505 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 MLNRO43193 412 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF324O75467 553 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 DLX1P56177 255 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 TFF3Q07654 80 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 SIGIRRQ6IA17 410 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CYB561D1Q8N8Q1 229 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 OR10D4PQ8NGN7 298 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 GALNT14Q96FL9 552 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 NEU1Q99519 415 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 GSX1Q9H4S2 264 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 ELOA3CA0A087WX78 387 aaPredicted RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 TRAV24A0A0B4J272 114 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 NUDT3O95989 172 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 RHOGP84095 191 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 A8MWL6 223 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 IGHG3P01860 377 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 B3GALT5-AS1P59052 145 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 RELBQ01201 579 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF345Q14585 488 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 ZNF585BQ52M93 769 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CLRN3Q8NCR9 226 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 CLDND2Q8NHS1 167 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 MRPL32Q9BYC8 188 aaKnown RBP4.47□□□□□ -1.69
LRP6-203ENST00000538239 FANCMQ8IYD8 2048 aa4.47□□□□□ -1.69
LRP6-203ENST00000538239 E7EQL1 145 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 H3BUX3 64 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 SIGLEC5O15389 551 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 HLA-DRB1P01911 266 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 RAB24Q969Q5 203 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 NABP1Q96AH0 204 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 A6NNC1 897 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 YPEL1O60688 119 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 NPIPB7O75200 414 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 PRB4P10163 310 aaPredicted RBP4.46□□□□□ -1.69
LRP6-203ENST00000538239 EGR1P18146 543 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 MDKP21741 143 aaPredicted RBP4.46□□□□□ -1.69
LRP6-203ENST00000538239 SRSF7Q16629 238 aaKnown RBP eCLIP4.46□□□□□ -1.69
LRP6-203ENST00000538239 OR1N2Q8NGR9 330 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 YPEL2Q96QA6 119 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 MOB4Q9Y3A3 225 aa4.46□□□□□ -1.69
LRP6-203ENST00000538239 M0R3E3 92 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 GATA2P23769 480 aaPredicted RBP4.46□□□□□ -1.7
LRP6-203ENST00000538239 ZNF502Q8TBZ5 544 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 RARRES2Q99969 163 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 HSPB8Q9UJY1 196 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 C7orf66A4D0T2 115 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 B4DEV8 164 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 RAMP3O60896 148 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 CD74P04233 296 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 SLC25A16P16260 332 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 VAMP3Q15836 100 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 GLRX5Q86SX6 157 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 KLK15Q9H2R5 256 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 TRGV2A0A075B6R0 118 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1-9A0A0C4DH69 117 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 DPRXA6NFQ7 191 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 LILRA1O75019 489 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 IGFBP3P17936 291 aaPredicted RBP4.46□□□□□ -1.7
LRP6-203ENST00000538239 C2orf83Q53S99 150 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms