RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 GGNBP1Q5YKI7 109 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM183AQ8IXX5 376 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 JAGN1Q8N5M9 183 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 DRAM1Q8N682 238 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 OR10A7Q8NGE5 316 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 OR10X1Q8NGY0 326 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 UBALD1Q8TB05 177 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 RNF126Q9BV68 326 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 SELENOIQ9C0D9 397 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 SLC5A7Q9GZV3 580 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 SLC25A31Q9H0C2 315 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 LINC00574Q9H8X3 128 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 SPACA1Q9HBV2 294 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF230Q9UIE0 474 aaPredicted RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 MOB4Q9Y3A3 225 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 IGHV3-43A0A0B4J1X8 118 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 A0A1W2PPI3 338 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 TCRBV4S1A1TA0A5B7 111 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 C9JQL5 133 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 PPP5D1E7EU14 171 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 SDCBPO00560 298 aaPredicted RBP6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 HSPA12AO43301 675 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 CIDEAO60543 219 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 PMP2P02689 132 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 CD3DP04234 171 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 AMY1AP04745 511 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 AMY2AP04746 511 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 SEC11BP0C7V7 166 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 IGHV3-43DP0DP04 118 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 CD33P20138 364 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 RAB7AP51149 207 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 FAAP20Q6NZ36 180 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 C10orf99Q6UWK7 81 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 GLIPR1L1Q6UWM5 242 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 SLC35E3Q7Z769 313 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 THNSL2Q86YJ6 484 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 OR4X2Q8NGF9 303 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 OR10G4Q8NGN3 311 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 SECTM1Q8WVN6 248 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 SCGB3A2Q96PL1 93 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 HIPK2Q9H2X6 1198 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 TAF9BQ9HBM6 251 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 MRPS28Q9Y2Q9 187 aaKnown RBP6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 VWFP04275 2813 aa6.79□□□□□ -1.32
SFSWAP-202ENST00000535202 IGHV3-72A0A0B4J1Y9 119 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 KIR2DL5BA0A0G2JN68 375 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 KIR2DL5BA0A0G2JPC4 375 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A18PA6NE21 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A16PA6NEW6 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A20PA6NIJ5 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A9PA6NNJ1 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A12PA8MX19 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A5PA8MXJ8 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF736B4DX44 427 aaPredicted RBP6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 C15orf65H3BRN8 121 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 K7EP13 123 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 HSD17B6O14756 317 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 EREGO14944 169 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 SCGNO76038 276 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 IGKV1D-33P01593 117 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 IGKV1-33P01594 117 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 PF4P02776 101 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A15PP0C7V4 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A13PP0C7W8 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A14PP0C7W9 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM90A24PP0C7X0 464 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 GZMBP10144 247 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 GZMHP20718 246 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 REG1BP48304 166 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 RND2P52198 227 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 IQCJQ1A5X6 159 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM241Q24JQ0 296 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF674Q2M3X9 581 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 SCGB2B2Q4G0G5 96 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 TCTEX1D4Q5JR98 221 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 C1orf194Q5T5A4 169 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 KPRPQ5T749 579 aaPredicted RBP6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM53AQ6NSI3 398 aaPredicted RBP6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 CDPF1Q6NVV7 123 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF497Q6ZNH5 498 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 TMED4Q7Z7H5 227 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 MOB3BQ86TA1 216 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 KIR2DL5AQ8N109 375 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF664Q8N3J9 261 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 ISOC2Q96AB3 205 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 PRO1933Q9H354 126 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 BANF2Q9H503 90 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 PLEKHA2Q9HB19 425 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 TRAPPC2LQ9UL33 140 aa6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 TSSC4Q9Y5U2 329 aaPredicted RBP6.78□□□□□ -1.32
SFSWAP-202ENST00000535202 TRBV24-1A0A075B6N3 115 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 IGHV1-3A0A0C4DH29 117 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms