RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	THOC7	Q6I9Y2	204 aa	Known RBP	11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	C19orf35	Q6ZS72	473 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	H2BFWT	Q7Z2G1	175 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	OR51S1	Q8NGJ8	323 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	MRAP	Q8TCY5	172 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	FANCD2OS	Q96PS1	177 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	SLC2A8	Q9NY64	477 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	FKBP11	Q9NYL4	201 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	FBXL7	Q9UJT9	491 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	KLK9	Q9UKQ9	250 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	PRND	Q9UKY0	176 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	C14orf166	Q9Y224	244 aa	Known RBP	11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	B3GALNT1	O75752	331 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	TRBV12-3	P01733	135 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	REG1A	P05451	166 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	DEFA4	P12838	97 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	HIST1H1B	P16401	226 aa	Known RBP	11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	C15orf32	Q32M92	178 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	ACSM6	Q6P461	480 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	ZNF429	Q86V71	674 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382		Q8N402	240 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	OR10W1	Q8NGF6	305 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	OR5B3	Q8NH48	314 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	NDUFA4L2	Q9NRX3	87 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	TMEM14B	Q9NUH8	114 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	SCP2D1	Q9UJQ7	156 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	GPR132	Q9UNW8	380 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	OR51B2	Q9Y5P1	312 aa		11.15	□□□□□ -0.62
CTSB-231	ENST00000534382	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	C15orf61	A6NNL5	157 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	NDUFB8	O95169	186 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	ETV6	P41212	452 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	AP3S2	P59780	193 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	KLF5	Q13887	457 aa	Predicted RBP	11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	ZNF79	Q15937	498 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	SP6	Q3SY56	376 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	FAM209B	Q5JX69	171 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	SPANXN2	Q5MJ10	180 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	GDPD1	Q8N9F7	314 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	LSM10	Q969L4	123 aa	Known RBP	11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	TRIM63	Q969Q1	353 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	HINT2	Q9BX68	163 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	C5orf66	Q9H5L9	145 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	MCUB	Q9NWR8	336 aa		11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	PRKDC	P78527	4128 aa	Known RBP	11.14	□□□□□ -0.63
CTSB-231	ENST00000534382	IGLV11-55	A0A075B6I3	123 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	DBX1	A6NMT0	343 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382		K7EIL1	84 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	SAP30	O75446	220 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	ATG12	O94817	140 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	OR13C7	P0DN81	318 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	UCP1	P25874	307 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	FAU	P35544	74 aa	Known RBP	11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	WT1-AS	Q06250	92 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	KLF9	Q13886	244 aa	Predicted RBP	11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	TATDN3	Q17R31	274 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	RPEL1	Q2QD12	228 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	TRIM16L	Q309B1	348 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	TOMM5	Q8N4H5	51 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	OR6Q1	Q8NGQ2	317 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	OR4A16	Q8NH70	328 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	TMEM56	Q96MV1	263 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	SCGB3A2	Q96PL1	93 aa		11.13	□□□□□ -0.63
CTSB-231	ENST00000534382	BMPR1B	O00238	502 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	IGKV1-5	P01602	117 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	AKR1C2	P52895	323 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	SYNJ2BP	P57105	145 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	EEF1AKMT3	Q96AZ1	226 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	OR4C12	Q96R67	309 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	ELOVL1	Q9BW60	279 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	NAA60	Q9H7X0	242 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	THYN1	Q9P016	225 aa		11.12	□□□□□ -0.63
CTSB-231	ENST00000534382	CRYM-AS1	A6NIL9	109 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	CYB5B	O43169	146 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	OR5AC1	P0C628	307 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382		P0C879	139 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	DHODH	Q02127	395 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	IZUMO4	Q1ZYL8	232 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	OR9G4	Q8NGQ1	327 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	GLYATL2	Q8WU03	294 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	DEDD2	Q8WXF8	326 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	CXorf58	Q96LI9	332 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	SRR	Q9GZT4	340 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	TMEM222	Q9H0R3	208 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	DMRT1	Q9Y5R6	373 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	DNAH3	Q8TD57	4116 aa		11.11	□□□□□ -0.63
CTSB-231	ENST00000534382	TRBV7-1	A0A0A6YYK4	115 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382		A0A0B4J293	547 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	CDS2	O95674	445 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	IGHV3-23	P01764	117 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	MECP2	P51608	486 aa	Known RBP	11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	HSPE1	P61604	102 aa	Known RBP	11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	DEFB121	Q5J5C9	76 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	SLC25A24	Q6NUK1	477 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	CLEC19A	Q6UXS0	136 aa		11.1	□□□□□ -0.63
CTSB-231	ENST00000534382	SGPP2	Q8IWX5	399 aa		11.1	□□□□□ -0.63

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