RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 HSD17B13Q7Z5P4 300 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-227ENST00000533909 OR51S1Q8NGJ8 323 aa10.33□□□□□ -0.76
CAPN1-227ENST00000533909 MRGPRFQ96AM1 343 aa10.33□□□□□ -0.76
CAPN1-227ENST00000533909 SCGB3A2Q96PL1 93 aa10.33□□□□□ -0.76
CAPN1-227ENST00000533909 SRSF8Q9BRL6 282 aaKnown RBP10.33□□□□□ -0.76
CAPN1-227ENST00000533909 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
CAPN1-227ENST00000533909 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-227ENST00000533909 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
CAPN1-227ENST00000533909 NSG2Q9Y328 171 aa10.33□□□□□ -0.76
CAPN1-227ENST00000533909 TEX50A0A1B0GTY4 177 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 E7EUB6 86 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 PTBP1P26599 531 aaKnown RBP eCLIP10.32□□□□□ -0.76
CAPN1-227ENST00000533909 INSL3P51460 131 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 ZNF45Q02386 682 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 ZNF429Q86V71 674 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 TOMM5Q8N4H5 51 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-227ENST00000533909 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
CAPN1-227ENST00000533909 RRNAD1Q96FB5 475 aaKnown RBP10.32□□□□□ -0.76
CAPN1-227ENST00000533909 TMEM56Q96MV1 263 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 OR4C12Q96R67 309 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 SOSTQ9BQB4 213 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 THYN1Q9P016 225 aa10.32□□□□□ -0.76
CAPN1-227ENST00000533909 TRBV9A0A0B4J1U6 114 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 A0A1B0GW64 132 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 CRYGCP07315 174 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 EGFEM1PQ0D2K5 195 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 C19orf35Q6ZS72 473 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 CADM3Q8N126 398 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 EEF1AKMT3Q96AZ1 226 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 SEC22AQ96IW7 307 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 V9GYH0 126 aa10.31□□□□□ -0.76
CAPN1-227ENST00000533909 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 C15orf61A6NNL5 157 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 LY86O95711 162 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 CTRB1P17538 263 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 KRTAP10-11P60412 298 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 SP6Q3SY56 376 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 DEFB121Q5J5C9 76 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 ZNF57Q68EA5 555 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-227ENST00000533909 CTRB2Q6GPI1 263 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 CCDC190Q86UF4 302 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 SGPP2Q8IWX5 399 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 OR10W1Q8NGF6 305 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 PDCD10Q9BUL8 212 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 NAA60Q9H7X0 242 aa10.3□□□□□ -0.76
CAPN1-227ENST00000533909 CGB1A6NKQ9 187 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 NDUFB8O95169 186 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 IGKV1-39P01597 117 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 IGKV1D-39P04432 117 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 SYNJ2BPP57105 145 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
CAPN1-227ENST00000533909 TRIQKQ629K1 86 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 SLC25A24Q6NUK1 477 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 GDPD1Q8N9F7 314 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 C5orf66Q9H5L9 145 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 NDUFA4L2Q9NRX3 87 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 TMEM14BQ9NUH8 114 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 SLC2A8Q9NY64 477 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
CAPN1-227ENST00000533909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.28□□□□□ -0.76
CAPN1-227ENST00000533909 TRBV12-3P01733 135 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 IGHV3-23P01764 117 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 OR5AC1P0C628 307 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 DHODHQ02127 395 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 WT1-ASQ06250 92 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 ACSM6Q6P461 480 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 OR6Q1Q8NGQ2 317 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 OR1L6Q8NGR2 347 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 RTBDNQ9BSG5 229 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-227ENST00000533909 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 PLEKHA3Q9HB20 300 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 GPR132Q9UNW8 380 aa10.28□□□□□ -0.76
CAPN1-227ENST00000533909 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-227ENST00000533909 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 WI2-2373I1.2A0A1W2PRP0 233 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 PPP5D1E7EU14 171 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 GGCTO75223 188 aaKnown RBP10.27□□□□□ -0.77
CAPN1-227ENST00000533909 IFNA17P01571 189 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 IGKV1-5P01602 117 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 ANXA3P12429 323 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 AKR1C4P17516 323 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 UCP1P25874 307 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 ARL3P36405 182 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 ETV6P41212 452 aa10.27□□□□□ -0.77
CAPN1-227ENST00000533909 HSPE1P61604 102 aaKnown RBP10.27□□□□□ -0.77
CAPN1-227ENST00000533909 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.77
CAPN1-227ENST00000533909 KLF9Q13886 244 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-227ENST00000533909 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-227ENST00000533909 ZNF79Q15937 498 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms