RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 IGKV1-16P04430 117 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 F2RP25116 425 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 LGALS7P47929 136 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 LINC00205P59089 165 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 CATR1Q13166 79 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 PSG5Q15238 335 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 TCTEX1D1Q8N7M0 179 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 ZNF431Q8TF32 576 aaPredicted RBP12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 TCTEX1D2Q8WW35 142 aa12.11□□□□□ -0.47
CHMP4A-207ENST00000533523 hCG_2014768A0A024R1R8 64 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 C3orf85A0A1B0GTC6 90 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 LINC00473A8K010 186 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 SNRPGP15A8MWD9 76 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 H0Y980 276 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 SOX15O60248 233 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 OR5AC1P0C628 307 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 CRIP2P52943 208 aaPredicted RBP12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 TMEM267Q0VDI3 215 aaPredicted RBP12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 SP6Q3SY56 376 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 HARBI1Q96MB7 349 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 OR4C12Q96R67 309 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 KCNIP3Q9Y2W7 256 aa12.1□□□□□ -0.47
CHMP4A-207ENST00000533523 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 KMT2AQ03164 3969 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 IGHV4-30-4P0DP06 118 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 ANXA3P12429 323 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 CX3CL1P78423 397 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 TMEM187Q14656 261 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 TMEM177Q53S58 311 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 C19orf54Q5BKX5 351 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 OR2B11Q5JQS5 317 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 ADAMTSL5Q6ZMM2 481 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 TM2D3Q9BRN9 247 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 PRR13Q9NZ81 148 aa12.09□□□□□ -0.47
CHMP4A-207ENST00000533523 SHOXO15266 292 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 SLC25A17O43808 307 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 CA2P00918 260 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 TPPP2P59282 170 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 GLYATL2Q8WU03 294 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 MITD1Q8WV92 249 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 DDB2Q92466 427 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 PRELID3BQ9Y3B1 194 aa12.08□□□□□ -0.48
CHMP4A-207ENST00000533523 SSNA1O43805 119 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 FCGR3BO75015 233 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 UCP1P25874 307 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 KIR2DS2P43631 304 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 BRWD1-AS2P59051 145 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 PPP1R27Q86WC6 154 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 C12orf45Q8N5I9 185 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 CLCC1Q96S66 551 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 PHB2Q99623 299 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 ELOVL1Q9BW60 279 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
CHMP4A-207ENST00000533523 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 FCN1O00602 326 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 CRYZL1O95825 349 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 IGLV2-23P01705 113 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 HSPB1P04792 205 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 SERPINE2P07093 398 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 LPAR6P43657 344 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 SRPXP78539 464 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 ZNF585BQ52M93 769 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 AKIRIN2Q53H80 203 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 UXS1Q8NBZ7 420 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 LHFPL5Q8TAF8 219 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 FAM212BQ9NTI7 297 aaPredicted RBP12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
CHMP4A-207ENST00000533523 RBFOX2O43251 390 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 CNIH1O95406 144 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 UBE2KP61086 200 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 FXYD3Q14802 87 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 SELENOHQ8IZQ5 122 aaKnown RBP12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 CADM3Q8N126 398 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 LGI3Q8N145 548 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 TEX45Q8NA69 505 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 OR4S2Q8NH73 311 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 CD300LFQ8TDQ1 290 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 TMEM56Q96MV1 263 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 MED28Q9H204 178 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 EDA2RQ9HAV5 297 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 TMEM56-RWDD3S4R434 201 aa12.05□□□□□ -0.48
CHMP4A-207ENST00000533523 S1PR2O95136 353 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms