RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 OR4S2Q8NH73 311 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
SSH3-210ENST00000532881 TANC2Q9HCD6 1990 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 NAV3Q8IVL0 2385 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 FCN3O75636 299 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 OR10J4P0C629 311 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 TIMP3P35625 211 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 CR1LQ2VPA4 569 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 AARDQ4LEZ3 155 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 SFRP2Q96HF1 295 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 OR51B2Q9Y5P1 312 aa12.19□□□□□ -0.46
SSH3-210ENST00000532881 F6UZH7 168 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 TEPPQ6URK8 271 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 KCNIP2Q9NS61 270 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 RNF7Q9UBF6 113 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 TRGV10A0A0A0MS01 117 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 PDE6DO43924 150 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 GCHFRP30047 84 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 HSPE1P61604 102 aaKnown RBP12.18□□□□□ -0.46
SSH3-210ENST00000532881 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 TRAPPC1Q9Y5R8 145 aa12.18□□□□□ -0.46
SSH3-210ENST00000532881 APC2O95996 2303 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 J3QR06 171 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 SLC35B1P78383 322 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 PAX5Q02548 391 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 STUMQ69YW2 141 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 ZNF664Q8N3J9 261 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 IGLV3-9A0A075B6K5 115 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 CXorf1O96002 111 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 OR4A8P0C604 315 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 CBLN1P23435 193 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 CCKARP32238 428 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 CFHR2P36980 270 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 RPP30P78346 268 aaKnown RBP12.17□□□□□ -0.46
SSH3-210ENST00000532881 SSBP2P81877 361 aaPredicted RBP12.17□□□□□ -0.46
SSH3-210ENST00000532881 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 OR9G1Q8NH87 305 aa12.17□□□□□ -0.46
SSH3-210ENST00000532881 TPRP12270 2363 aaKnown RBP12.16□□□□□ -0.46
SSH3-210ENST00000532881 A0A087X0M5 115 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 A0A1B0GX30 115 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 VENTXO95231 258 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 RPL15P61313 204 aaKnown RBP12.16□□□□□ -0.46
SSH3-210ENST00000532881 MZT1Q08AG7 82 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 MORN5Q5VZ52 161 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 WFDC8Q8IUA0 241 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 RBMXL3Q8N7X1 1067 aaKnown RBP12.16□□□□□ -0.46
SSH3-210ENST00000532881 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 RAB1CQ92928 201 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 ABCA1O95477 2261 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 CEP295Q9C0D2 2601 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 LINC00869P0C866 280 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 DDTP30046 118 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 ADMP35318 185 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 JOSD1Q15040 202 aaPredicted RBP12.16□□□□□ -0.46
SSH3-210ENST00000532881 PSG5Q15238 335 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 ELOVL5Q9NYP7 299 aa12.16□□□□□ -0.46
SSH3-210ENST00000532881 TRAV5A0A0B4J249 113 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 A0A1B0GV90 55 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 MDFIC2A0A1B0GVS7 189 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 TGOLN2O43493 480 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 CD40P25942 277 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 CHRNB4P30926 498 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 LGALS4P56470 323 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 TMPRSS3P57727 454 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 KCNIP4Q6PIL6 250 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 MRPL41Q8IXM3 137 aaKnown RBP12.15□□□□□ -0.46
SSH3-210ENST00000532881 LINC00469Q8N7U9 141 aa12.15□□□□□ -0.46
SSH3-210ENST00000532881 ZMAT5Q9UDW3 170 aaKnown RBP12.15□□□□□ -0.46
SSH3-210ENST00000532881 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 F2Z2F3 143 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 SAA1P0DJI8 122 aaPredicted RBP12.15□□□□□ -0.47
SSH3-210ENST00000532881 APELAP0DMC3 54 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 CRYBB3P26998 211 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.47
SSH3-210ENST00000532881 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.47
SSH3-210ENST00000532881 PRR31Q5SQ13 230 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 C1orf185Q5T7R7 199 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 TEX38Q6PEX7 206 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 TMEM144Q7Z5S9 345 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 DOLPP1Q86YN1 238 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 NHLRC2Q8NBF2 726 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.47
SSH3-210ENST00000532881 FOXA2Q9Y261 457 aaPredicted RBP12.15□□□□□ -0.47
SSH3-210ENST00000532881 DVL1O14640 695 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 KLK10O43240 276 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 MPDU1O75352 247 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 CEACAM4O75871 244 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 FXYD3Q14802 87 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
SSH3-210ENST00000532881 ZNF503Q96F45 646 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms