RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 QTRT1Q9BXR0 403 aaKnown RBP19.28■□□□□ 0.68
USP48-214ENST00000532737 SLA2Q9H6Q3 261 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 A0A0B4J293 547 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 IGLC7A0M8Q6 106 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 BRI3O95415 125 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 PRH1P02810 166 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 TRAPPC2P0DI81 140 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 TRAPPC2BP0DI82 140 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 OR10W1Q8NGF6 305 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 RRNAD1Q96FB5 475 aaKnown RBP19.27■□□□□ 0.68
USP48-214ENST00000532737 OR5B12Q96R08 314 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 HINT2Q9BX68 163 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 NDUFA4L2Q9NRX3 87 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 FKBP11Q9NYL4 201 aa19.27■□□□□ 0.68
USP48-214ENST00000532737 NPIPB5A8MRT5 1133 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 ANXA3P12429 323 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 VAMP1P23763 118 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 PSMB6P28072 239 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 PPP1R1AQ13522 171 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 ETV3LQ6ZN32 361 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 C4orf3Q8WVX3 66 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 IL22RA2Q969J5 263 aa19.26■□□□□ 0.67
USP48-214ENST00000532737 RBMXL2O75526 392 aaKnown RBP19.25■□□□□ 0.67
USP48-214ENST00000532737 REG1AP05451 166 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 CRYGCP07315 174 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 SLC6A1P30531 599 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 DEFA5Q01523 94 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 DEFB136Q30KP8 78 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 Q6ZRM9 215 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 OR5B3Q8NH48 314 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 RNASE11Q8TAA1 199 aaKnown RBP19.25■□□□□ 0.67
USP48-214ENST00000532737 RAX2Q96IS3 184 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 DUX3Q96PT4 197 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 SRSF8Q9BRL6 282 aaKnown RBP19.25■□□□□ 0.67
USP48-214ENST00000532737 ZNF257Q9Y2Q1 563 aa19.25■□□□□ 0.67
USP48-214ENST00000532737 SFT2D2O95562 160 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 CTRB1P17538 263 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 ASAH1Q13510 395 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 CTRB2Q6GPI1 263 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 LGI3Q8N145 548 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 SLC35G3Q8N808 338 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 GPR146Q96CH1 333 aa19.24■□□□□ 0.67
USP48-214ENST00000532737 I3L521 148 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 IGHV3-11P01762 117 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 ANXA7P20073 488 aaKnown RBP19.23■□□□□ 0.67
USP48-214ENST00000532737 UBE2MP61081 183 aaKnown RBP19.23■□□□□ 0.67
USP48-214ENST00000532737 HSPE1P61604 102 aaKnown RBP19.23■□□□□ 0.67
USP48-214ENST00000532737 SRPXP78539 464 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 WT1-ASQ06250 92 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 ANKRD55Q3KP44 614 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 THOC7Q6I9Y2 204 aaKnown RBP19.23■□□□□ 0.67
USP48-214ENST00000532737 ZNF429Q86V71 674 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 FAM219AQ8IW50 185 aa19.23■□□□□ 0.67
USP48-214ENST00000532737 CMYA5Q8N3K9 4069 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 TRBV9A0A0B4J1U6 114 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 CCL24O00175 119 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 TCRBP04435 133 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 OR13C7P0DN81 318 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 RHOGP84095 191 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 RUNX1Q01196 453 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 LYZL2Q7Z4W2 148 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 LSM10Q969L4 123 aaKnown RBP19.22■□□□□ 0.67
USP48-214ENST00000532737 FANCD2OSQ96PS1 177 aa19.22■□□□□ 0.67
USP48-214ENST00000532737 ALX4Q9H161 411 aaPredicted RBP19.22■□□□□ 0.67
USP48-214ENST00000532737 A0A0B4J2A0 478 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 ST8SIA3O43173 380 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 PF4P02776 101 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 MYCNOSP40205 109 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 MZT2BQ6NZ67 158 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 P2RX4Q99571 388 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 C20orf85Q9H1P6 137 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 SHPKQ9UHJ6 478 aa19.21■□□□□ 0.67
USP48-214ENST00000532737 A0A0G2JLM5 398 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 C9orf170A2RU37 121 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 OR2J3O76001 311 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 LGALS1P09382 135 aaKnown RBP19.2■□□□□ 0.66
USP48-214ENST00000532737 PRCDQ00LT1 54 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 KLK9Q2XQG4 91 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 HSD17B13Q7Z5P4 300 aaPredicted RBP19.2■□□□□ 0.66
USP48-214ENST00000532737 CACNG5Q9UF02 275 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 KLK9Q9UKQ9 250 aa19.2■□□□□ 0.66
USP48-214ENST00000532737 NOTCH1P46531 2555 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 C13orf42A0A1B0GVH6 325 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 FAM240BA0A1B0GVZ2 78 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 OR4E1P0C645 316 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 SPINK9Q5DT21 86 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 NMSQ5H8A3 153 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 MRPL41Q8IXM3 137 aaKnown RBP19.19■□□□□ 0.66
USP48-214ENST00000532737 LRTM2Q8N967 370 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 OR1N2Q8NGR9 330 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 USMG5Q96IX5 58 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.19■□□□□ 0.66
USP48-214ENST00000532737 DMRT1Q9Y5R6 373 aa19.19■□□□□ 0.66
USP48-214ENST00000532737 TRAV6A0A075B6T7 132 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 DHFRP00374 187 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 DEFA4P12838 97 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 MECP2P51608 486 aaKnown RBP19.18■□□□□ 0.66
USP48-214ENST00000532737 DHRS2Q13268 280 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 AARDQ4LEZ3 155 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 PDLIM3Q53GG5 364 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms