RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RPA2P15927 270 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 F2RP25116 425 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
CPSF1-205ENST00000531042 PLET1Q6UQ28 207 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 BTNL8Q6UX41 500 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 GDPD1Q8N9F7 314 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 MARC2Q969Z3 335 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 MOB3AQ96BX8 217 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 ZNF2Q9BSG1 426 aaPredicted RBP11.82□□□□□ -0.52
CPSF1-205ENST00000531042 TRAV25A0A0B4J276 109 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 CYB5BO43169 146 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 PMP2P02689 132 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 RLN1P04808 185 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 SERPINE2P07093 398 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 TRAPPC2P0DI81 140 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 TRAPPC2BP0DI82 140 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 NAT1P18440 290 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 ELLP55199 621 aaPredicted RBP11.81□□□□□ -0.52
CPSF1-205ENST00000531042 TAS2R20P59543 309 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 ERVK-16P61578 105 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 WT1-ASQ06250 92 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 ANKRD55Q3KP44 614 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 TMEM69Q5SWH9 247 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
CPSF1-205ENST00000531042 SAMD12Q8N8I0 201 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 OR1L8Q8NGR8 309 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
CPSF1-205ENST00000531042 ZNF436Q9C0F3 470 aaPredicted RBP11.81□□□□□ -0.52
CPSF1-205ENST00000531042 MRPL27Q9P0M9 148 aaKnown RBP11.81□□□□□ -0.52
CPSF1-205ENST00000531042 EPPK1P58107 5090 aaKnown RBP11.8□□□□□ -0.52
CPSF1-205ENST00000531042 IGHV3-35A0A0C4DH35 117 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 TGOLN2O43493 480 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 LPAR6P43657 344 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 TAS2R46P59540 309 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 SLC25A24Q6NUK1 477 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 CADM3Q8N126 398 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 OR5H2Q8NGV7 314 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 FCAMRQ8WWV6 532 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
CPSF1-205ENST00000531042 YIPF6Q96EC8 236 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 NDUFA4L2Q9NRX3 87 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 UFC1Q9Y3C8 167 aa11.8□□□□□ -0.52
CPSF1-205ENST00000531042 HYDINQ4G0P3 5121 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 KRASP01116 189 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 LSM3P62310 102 aaKnown RBP11.79□□□□□ -0.52
CPSF1-205ENST00000531042 RBPMS2Q6ZRY4 209 aaKnown RBP11.79□□□□□ -0.52
CPSF1-205ENST00000531042 LYSMD2Q8IV50 215 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 CMTM1Q8IZ96 169 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 GGTLC1Q9BX51 225 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 FXYD6Q9H0Q3 95 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 NSG2Q9Y328 171 aa11.79□□□□□ -0.52
CPSF1-205ENST00000531042 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
CPSF1-205ENST00000531042 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
CPSF1-205ENST00000531042 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 GPR31O00270 319 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 PRSS3P35030 304 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 G6PCP35575 357 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 MFAP2P55001 183 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 OR1L6Q8NGR2 347 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 OR6F1Q8NGZ6 308 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 TMEM190Q8WZ59 177 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
CPSF1-205ENST00000531042 BSCL2Q96G97 398 aaPredicted RBP11.78□□□□□ -0.52
CPSF1-205ENST00000531042 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 HINT2Q9BX68 163 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 C5orf66Q9H5L9 145 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
CPSF1-205ENST00000531042 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
CPSF1-205ENST00000531042 SNAPC5O75971 98 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 JTBO76095 146 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 HRH1P35367 487 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 SPSB3Q6PJ21 355 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 OR2C3Q8N628 320 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 SCARB1Q8WTV0 552 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 C21orf62Q9NYP8 219 aa11.77□□□□□ -0.53
CPSF1-205ENST00000531042 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 F8W735 103 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-205ENST00000531042 EIF4EP06730 217 aaKnown RBP11.76□□□□□ -0.53
CPSF1-205ENST00000531042 HLA-DMAP28067 261 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 SLC38A6Q8IZM9 456 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 GPX8Q8TED1 209 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 SLC25A46Q96AG3 418 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 TMEM56Q96MV1 263 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 SPAG8Q99932 426 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-205ENST00000531042 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 VCX3AQ9NNX9 186 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 DAZ1Q9NQZ3 744 aaKnown RBP11.76□□□□□ -0.53
CPSF1-205ENST00000531042 FKBP11Q9NYL4 201 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 PRNDQ9UKY0 176 aa11.76□□□□□ -0.53
CPSF1-205ENST00000531042 A0A087WXM4 84 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 K7EIM0 57 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 NDUFA4O00483 81 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 TSPAN4O14817 238 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms