RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 P0C879 139 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 IL7P13232 177 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 CTRB1P17538 263 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 SLURP1P55000 103 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 RHOGP84095 191 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 BEAN1Q3B7T3 259 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 LHFPL5Q8TAF8 219 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 GLYATL2Q8WU03 294 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 SCGB3A2Q96PL1 93 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 HINT2Q9BX68 163 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 NDUFA4L2Q9NRX3 87 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 TMEM14BQ9NUH8 114 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 PRR13Q9NZ81 148 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 PRNDQ9UKY0 176 aa9.17□□□□□ -0.94
LTBP3-219ENST00000530990 A0A0G2JRQ6 117 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 ANKRD34BA5PLL1 514 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 FAM223BA6NKX1 122 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 LINC01619G3V211 115 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 TRAPPC2P0DI81 140 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 TRAPPC2BP0DI82 140 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 AKR1C4P17516 323 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 CCR6P51684 374 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 DEFA6Q01524 100 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 WT1-ASQ06250 92 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 EXOSC2Q13868 293 aaKnown RBP9.16□□□□□ -0.94
LTBP3-219ENST00000530990 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
LTBP3-219ENST00000530990 TMED4Q7Z7H5 227 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 FAM223AQ8IWN6 122 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 OR5B3Q8NH48 314 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 OR4A16Q8NH70 328 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 DPF1Q92782 380 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
LTBP3-219ENST00000530990 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
LTBP3-219ENST00000530990 PTTG2Q9NZH5 202 aa9.16□□□□□ -0.94
LTBP3-219ENST00000530990 NOTCH3Q9UM47 2321 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 ATG12O94817 140 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 DUS4LO95620 317 aaKnown RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 CDS2O95674 445 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 TRBV12-3P01733 135 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 HSPB1P04792 205 aaKnown RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 BTCP35070 178 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 SUPT4H1P63272 117 aaKnown RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 DHODHQ02127 395 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 TMEM187Q14656 261 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 C15orf32Q32M92 178 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 KPRPQ5T749 579 aaPredicted RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 TMEM268Q5VZI3 342 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 ZNF343Q6P1L6 599 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 SGPP2Q8IWX5 399 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 SELENOHQ8IZQ5 122 aaKnown RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 NECAP1Q8NC96 275 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 RNASE11Q8TAA1 199 aaKnown RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 DLX4Q92988 240 aaPredicted RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 RBPMSQ93062 196 aaKnown RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 GALNT14Q96FL9 552 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 SLC25A21Q9BQT8 299 aaPredicted RBP9.15□□□□□ -0.94
LTBP3-219ENST00000530990 BATF3Q9NR55 127 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 FBXL7Q9UJT9 491 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 DMRT1Q9Y5R6 373 aa9.15□□□□□ -0.94
LTBP3-219ENST00000530990 IGLV11-55A0A075B6I3 123 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 NAP1L6A6NFF2 107 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 NDUFB8O95169 186 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 DHFRP00374 187 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 OR13C7P0DN81 318 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 DEFA4P12838 97 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 MECP2P51608 486 aaKnown RBP9.14□□□□□ -0.95
LTBP3-219ENST00000530990 ATP5G2Q06055 141 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
LTBP3-219ENST00000530990 KLK9Q2XQG4 91 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 LINC00299Q6ZSB3 139 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 HSD17B13Q7Z5P4 300 aaPredicted RBP9.14□□□□□ -0.95
LTBP3-219ENST00000530990 ZNF429Q86V71 674 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 DCUN1D4Q92564 292 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 RRNAD1Q96FB5 475 aaKnown RBP9.14□□□□□ -0.95
LTBP3-219ENST00000530990 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
LTBP3-219ENST00000530990 FKBP11Q9NYL4 201 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 KLK9Q9UKQ9 250 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 S4R3C0 116 aa9.14□□□□□ -0.95
LTBP3-219ENST00000530990 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 A0A0B4J293 547 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 OVOL1O14753 267 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 NDUFB6O95139 128 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 IGHV3-23P01764 117 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 HIST1H1BP16401 226 aaKnown RBP9.13□□□□□ -0.95
LTBP3-219ENST00000530990 HOXD3P31249 432 aaPredicted RBP9.13□□□□□ -0.95
LTBP3-219ENST00000530990 MFAP2P55001 183 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 PRCDQ00LT1 54 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 PDLIM3Q53GG5 364 aaPredicted RBP9.13□□□□□ -0.95
LTBP3-219ENST00000530990 SPINK9Q5DT21 86 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 Q6ZRM9 215 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 FAM219AQ8IW50 185 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 SLC35G3Q8N808 338 aa9.13□□□□□ -0.95
LTBP3-219ENST00000530990 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms