RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 NECAP1Q8NC96 275 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 OR10W1Q8NGF6 305 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 OR51B2Q9Y5P1 312 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 DMRT1Q9Y5R6 373 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 TRBV12-3P01733 135 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 TRAPPC2P0DI81 140 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 TRAPPC2BP0DI82 140 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 UCP1P25874 307 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 HOXD3P31249 432 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 WT1-ASQ06250 92 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 SPANXN2Q5MJ10 180 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 CCDC71LQ8N9Z2 235 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 SDHCQ99643 169 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 GPR61Q9BZJ8 451 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 RANGRFQ9HD47 186 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 MCUBQ9NWR8 336 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 SCP2D1Q9UJQ7 156 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 PRNDQ9UKY0 176 aa12.39□□□□□ -0.43
TSPAN4-218ENST00000529566 IGLV11-55A0A075B6I3 123 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 C15orf61A6NNL5 157 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 B3GALNT1O75752 331 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 SNAPC5O75971 98 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 OR2J3O76001 311 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 NDUFB8O95169 186 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 ATP5G2Q06055 141 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 IZUMO4Q1ZYL8 232 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 H2BFWTQ7Z2G1 175 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 TOMM5Q8N4H5 51 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 TMEM230Q96A57 120 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 NAA60Q9H7X0 242 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 AURKAIP1Q9NWT8 199 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 FKBP11Q9NYL4 201 aa12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 PEF1Q9UBV8 284 aaKnown RBP12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
TSPAN4-218ENST00000529566 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 A0A0B4J293 547 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 A6NHS1 94 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 CRYM-AS1A6NIL9 109 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 OVOL1O14753 267 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 CDS2O95674 445 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 OR5AC1P0C628 307 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 AP3S2P59780 193 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 KLF5Q13887 457 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 BAK1Q16611 211 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 C15orf32Q32M92 178 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 THOC7Q6I9Y2 204 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 OR5B3Q8NH48 314 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 LHFPL5Q8TAF8 219 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 DEDD2Q8WXF8 326 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 FBXL7Q9UJT9 491 aa12.37□□□□□ -0.43
TSPAN4-218ENST00000529566 OR13C7P0DN81 318 aa12.36□□□□□ -0.43
TSPAN4-218ENST00000529566 EXOSC2Q13868 293 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-218ENST00000529566 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
TSPAN4-218ENST00000529566 REC114Q7Z4M0 266 aa12.36□□□□□ -0.43
TSPAN4-218ENST00000529566 HSD17B13Q7Z5P4 300 aaPredicted RBP12.36□□□□□ -0.43
TSPAN4-218ENST00000529566 A0A0G2JRQ6 117 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 BMPR1BO00238 502 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 DHFRP00374 187 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 HIST1H1BP16401 226 aaKnown RBP12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 ZP3P21754 424 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 FAUP35544 74 aaKnown RBP12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 MFAP2P55001 183 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 ACSM6Q6P461 480 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 IL34Q6ZMJ4 242 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 OR4A16Q8NH70 328 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 LSM10Q969L4 123 aaKnown RBP12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 GALNT14Q96FL9 552 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 CCDC140Q96MF4 163 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 SCGB3A2Q96PL1 93 aa12.35□□□□□ -0.43
TSPAN4-218ENST00000529566 DEFA4P12838 97 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 INSL3P51460 131 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 HSPE1P61604 102 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 SUPT4H1P63272 117 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 DHODHQ02127 395 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 TRIM16LQ309B1 348 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 Q6ZRM9 215 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 ZNF429Q86V71 674 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 SELENOHQ8IZQ5 122 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 TMEM56Q96MV1 263 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 TMEM56-RWDD3S4R434 201 aa12.34□□□□□ -0.43
TSPAN4-218ENST00000529566 WI2-2373I1.2A0A1W2PRP0 233 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 K7EIL1 84 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 ATG12O94817 140 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 PRCDQ00LT1 54 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 TMEM187Q14656 261 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 OR2C3Q8N628 320 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 S4R3C0 116 aa12.33□□□□□ -0.44
TSPAN4-218ENST00000529566 MFSD2BA6NFX1 497 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 AKR1C2P52895 323 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms