RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 A0A0G2JLM5 398 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 IGLC7A0M8Q6 106 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 ANKRD34BA5PLL1 514 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 BRI3O95415 125 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 FGF2P09038 288 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 IL7P13232 177 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 ZNF616Q08AN1 781 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 SGPP2Q8IWX5 399 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 LHFPL5Q8TAF8 219 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 GLYATL2Q8WU03 294 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 DEDD2Q8WXF8 326 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 TMEM222Q9H0R3 208 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
CHRDL2-206ENST00000528789 LINC01619G3V211 115 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 B3GALNT1O75752 331 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 ATG12O94817 140 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 CRYGCP07315 174 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 CTRB1P17538 263 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 CCR6P51684 374 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 SLURP1P55000 103 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 DHODHQ02127 395 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 CTRB2Q6GPI1 263 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 RNASE11Q8TAA1 199 aaKnown RBP13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 NDUFA4L2Q9NRX3 87 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
CHRDL2-206ENST00000528789 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 A0A0G2JRQ6 117 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 CDS2O95674 445 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 HSPB1P04792 205 aaKnown RBP13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 OR8U8P0C7N1 319 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 P0C879 139 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 OR13C7P0DN81 318 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 DEFA4P12838 97 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 MECP2P51608 486 aaKnown RBP13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 ATP5G2Q06055 141 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 TMEM268Q5VZI3 342 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 SELENOHQ8IZQ5 122 aaKnown RBP13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 LSM10Q969L4 123 aaKnown RBP13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 RRNAD1Q96FB5 475 aaKnown RBP13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 USMG5Q96IX5 58 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 BATF3Q9NR55 127 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 FKBP11Q9NYL4 201 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 PTTG2Q9NZH5 202 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 FBXL7Q9UJT9 491 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 DNAH3Q8TD57 4116 aa13.47□□□□□ -0.25
CHRDL2-206ENST00000528789 FAM223BA6NKX1 122 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 NDUFB8O95169 186 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 DHFRP00374 187 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 TRBV12-3P01733 135 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 SUPT4H1P63272 117 aaKnown RBP13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 DEFA6Q01524 100 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 EXOSC2Q13868 293 aaKnown RBP13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 TMEM187Q14656 261 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 BEAN1Q3B7T3 259 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 SPINK9Q5DT21 86 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 FAM223AQ8IWN6 122 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 NECAP1Q8NC96 275 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 OR5B3Q8NH48 314 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 DCUN1D4Q92564 292 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 FANCD2OSQ96PS1 177 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 SRSF8Q9BRL6 282 aaKnown RBP13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 KCNIP3Q9Y2W7 256 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 S4R3C0 116 aa13.46□□□□□ -0.25
CHRDL2-206ENST00000528789 A0A0B4J293 547 aa13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 IGHV3-23P01764 117 aa13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 C15orf32Q32M92 178 aa13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 DLX4Q92988 240 aaPredicted RBP13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 RBPMSQ93062 196 aaKnown RBP13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 GALNT14Q96FL9 552 aa13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 RANGRFQ9HD47 186 aaPredicted RBP13.45□□□□□ -0.26
CHRDL2-206ENST00000528789 IGLV11-55A0A075B6I3 123 aa13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 PRB2P02812 416 aaPredicted RBP13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 HOXD3P31249 432 aaPredicted RBP13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 HSPE1P61604 102 aaKnown RBP13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 RBMS2Q15434 407 aaKnown RBP13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 TMEM56Q96MV1 263 aa13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 MCRIP2Q9BUT9 160 aaKnown RBP13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 PEF1Q9UBV8 284 aaKnown RBP13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 DMRT1Q9Y5R6 373 aa13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 TMEM56-RWDD3S4R434 201 aa13.44□□□□□ -0.26
CHRDL2-206ENST00000528789 CENPXA8MT69 81 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 SEC14L6B5MCN3 397 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 ST8SIA3O43173 380 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 NDUFB6O95139 128 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 DUS4LO95620 317 aaKnown RBP13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 ANXA3P12429 323 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 HIST1H1BP16401 226 aaKnown RBP13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 VAMP1P23763 118 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 BTCP35070 178 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 PRCDQ00LT1 54 aa13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 KPRPQ5T749 579 aaPredicted RBP13.43□□□□□ -0.26
CHRDL2-206ENST00000528789 Q6ZRM9 215 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms