RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 LYPD3O95274 346 aa7.15□□□□□ -1.26
CTNND1-219ENST00000528621 IGFBP2P18065 325 aa7.15□□□□□ -1.26
CTNND1-219ENST00000528621 C9orf106Q8NAJ2 232 aa7.15□□□□□ -1.26
CTNND1-219ENST00000528621 OR11H4Q8NGC9 324 aa7.15□□□□□ -1.26
CTNND1-219ENST00000528621 CBLN4Q9NTU7 201 aa7.15□□□□□ -1.26
CTNND1-219ENST00000528621 SIP14410 1827 aa7.15□□□□□ -1.26
CTNND1-219ENST00000528621 C17orf98A8MV24 154 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 K7ERU9 68 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 PEX7O00628 323 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 TAS2R60P59551 318 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 ZNF497Q6ZNH5 498 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 LRTM2Q8N967 370 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 MRPL13Q9BYD1 178 aaKnown RBP7.15□□□□□ -1.27
CTNND1-219ENST00000528621 FBXL15Q9H469 300 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 PRRC2BQ5JSZ5 2229 aaKnown RBP7.15□□□□□ -1.27
CTNND1-219ENST00000528621 LTBP1Q14766 1721 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 GAGE10A6NGK3 116 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 MEIG1Q5JSS6 88 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 FAM216BQ8N7L0 139 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 SDHCQ99643 169 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-219ENST00000528621 DPH3P1Q9H4G8 78 aa7.15□□□□□ -1.27
CTNND1-219ENST00000528621 RRHO14718 337 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 ZP1P60852 638 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 ICAM4Q14773 271 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 TBR1Q16650 682 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 PVRIGQ6DKI7 326 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 TMEM105Q8N8V8 129 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 TNFRSF14Q92956 283 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 DMRT1Q9Y5R6 373 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 A0A1B0GTI1 187 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 J3QRE1 110 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 CEACAM4O75871 244 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 CELA3BP08861 270 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 ZFP36L1Q07352 338 aaKnown RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 RPP21Q9H633 154 aaKnown RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 MTCL1Q9Y4B5 1905 aaKnown RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 LOC107984156A0A0G2JMH3 177 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 UPK2O00526 184 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 EFEMP2O95967 443 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 VDAC2P45880 294 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 CIARTQ8N365 385 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 OR4X2Q8NGF9 303 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 ARID1BQ8NFD5 2236 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 IZUMO1RA6ND01 250 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 C2orf88Q9BSF0 95 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 C19orf67A6NJJ6 358 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 NPIPB7O75200 414 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 ATP5LO75964 103 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 DSCR9P59020 149 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 RCC1LQ96I51 464 aaKnown RBP7.14□□□□□ -1.27
CTNND1-219ENST00000528621 C21orf62Q9NYP8 219 aa7.14□□□□□ -1.27
CTNND1-219ENST00000528621 CGAP01215 116 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 PRSS2P07478 247 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 LCTP09848 1927 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 LTBRP36941 435 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 PSG7Q13046 419 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 FAM201AQ5SY85 155 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 CLEC19AQ6UXS0 136 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 SLC25A28Q96A46 364 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 DUX3Q96PT4 197 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 SLC50A1Q9BRV3 221 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 IGHV3-48P01763 117 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 WDR82Q6UXN9 313 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 COLCA1Q6ZS62 124 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 TCF23Q7RTU1 214 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 KCNS1Q96KK3 526 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 F11RQ9Y624 299 aaKnown RBP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 C15orf61A6NNL5 157 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 NTN3O00634 580 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 EIF3GO75821 320 aaKnown RBP eCLIP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 IL18BPO95998 194 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 IGKV3-20P01619 116 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 FHITP49789 147 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 FAM166AQ6J272 317 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 NYNRINQ9P2P1 1898 aaKnown RBP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 SAA2-SAA4A0A096LPE2 208 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 SAA2P0DJI9 122 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 OR52E5Q8NH55 327 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 PLPPR1Q8TBJ4 325 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 ZNF418Q8TF45 676 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-219ENST00000528621 KLK15Q9H2R5 256 aa7.13□□□□□ -1.27
CTNND1-219ENST00000528621 PROB1E7EW31 1015 aa7.12□□□□□ -1.27
CTNND1-219ENST00000528621 H3BRM9 83 aa7.12□□□□□ -1.27
CTNND1-219ENST00000528621 NBR2O15453 112 aa7.12□□□□□ -1.27
CTNND1-219ENST00000528621 RNASE1P07998 156 aaKnown RBP7.12□□□□□ -1.27
CTNND1-219ENST00000528621 SRP19P09132 144 aaKnown RBP7.12□□□□□ -1.27
CTNND1-219ENST00000528621 OTX1P32242 354 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms