RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 HSD17B13Q7Z5P4 300 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-209ENST00000527469 OR51S1Q8NGJ8 323 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 MRGPRFQ96AM1 343 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 SCGB3A2Q96PL1 93 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 SRSF8Q9BRL6 282 aaKnown RBP10.33□□□□□ -0.76
CAPN1-209ENST00000527469 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-209ENST00000527469 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 NSG2Q9Y328 171 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 TEX50A0A1B0GTY4 177 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 E7EUB6 86 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 PTBP1P26599 531 aaKnown RBP eCLIP10.32□□□□□ -0.76
CAPN1-209ENST00000527469 INSL3P51460 131 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 ZNF45Q02386 682 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 ZNF429Q86V71 674 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 TOMM5Q8N4H5 51 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-209ENST00000527469 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
CAPN1-209ENST00000527469 RRNAD1Q96FB5 475 aaKnown RBP10.32□□□□□ -0.76
CAPN1-209ENST00000527469 TMEM56Q96MV1 263 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 OR4C12Q96R67 309 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 SOSTQ9BQB4 213 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 THYN1Q9P016 225 aa10.32□□□□□ -0.76
CAPN1-209ENST00000527469 TRBV9A0A0B4J1U6 114 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 A0A1B0GW64 132 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 CRYGCP07315 174 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 EGFEM1PQ0D2K5 195 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 C19orf35Q6ZS72 473 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 CADM3Q8N126 398 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 EEF1AKMT3Q96AZ1 226 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 SEC22AQ96IW7 307 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 V9GYH0 126 aa10.31□□□□□ -0.76
CAPN1-209ENST00000527469 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 C15orf61A6NNL5 157 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 LY86O95711 162 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 CTRB1P17538 263 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 KRTAP10-11P60412 298 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 SP6Q3SY56 376 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 DEFB121Q5J5C9 76 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 ZNF57Q68EA5 555 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-209ENST00000527469 CTRB2Q6GPI1 263 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 CCDC190Q86UF4 302 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 SGPP2Q8IWX5 399 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 OR10W1Q8NGF6 305 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 PDCD10Q9BUL8 212 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 NAA60Q9H7X0 242 aa10.3□□□□□ -0.76
CAPN1-209ENST00000527469 CGB1A6NKQ9 187 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 NDUFB8O95169 186 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 IGKV1-39P01597 117 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 IGKV1D-39P04432 117 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 SYNJ2BPP57105 145 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
CAPN1-209ENST00000527469 TRIQKQ629K1 86 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 SLC25A24Q6NUK1 477 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 GDPD1Q8N9F7 314 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 C5orf66Q9H5L9 145 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 NDUFA4L2Q9NRX3 87 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 TMEM14BQ9NUH8 114 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 SLC2A8Q9NY64 477 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
CAPN1-209ENST00000527469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.28□□□□□ -0.76
CAPN1-209ENST00000527469 TRBV12-3P01733 135 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 IGHV3-23P01764 117 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 OR5AC1P0C628 307 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 DHODHQ02127 395 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 WT1-ASQ06250 92 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 ACSM6Q6P461 480 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 OR6Q1Q8NGQ2 317 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 OR1L6Q8NGR2 347 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 RTBDNQ9BSG5 229 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-209ENST00000527469 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 PLEKHA3Q9HB20 300 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 GPR132Q9UNW8 380 aa10.28□□□□□ -0.76
CAPN1-209ENST00000527469 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-209ENST00000527469 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 WI2-2373I1.2A0A1W2PRP0 233 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 PPP5D1E7EU14 171 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 GGCTO75223 188 aaKnown RBP10.27□□□□□ -0.77
CAPN1-209ENST00000527469 IFNA17P01571 189 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 IGKV1-5P01602 117 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 ANXA3P12429 323 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 AKR1C4P17516 323 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 UCP1P25874 307 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 ARL3P36405 182 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 ETV6P41212 452 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 HSPE1P61604 102 aaKnown RBP10.27□□□□□ -0.77
CAPN1-209ENST00000527469 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.77
CAPN1-209ENST00000527469 KLF9Q13886 244 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-209ENST00000527469 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-209ENST00000527469 ZNF79Q15937 498 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms