RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ZNF32P17041 273 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 IGFBP3P17936 291 aaPredicted RBP3.55□□□□□ -1.84
SKP1-213ENST00000524288 ADCYAP1P18509 176 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 HTR1DP28221 377 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 HTR2CP28335 458 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 PRSS3P35030 304 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 PMELP40967 661 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 HCCSP53701 268 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 ELP2Q6IA86 826 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 C3orf33Q6P1S2 294 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
SKP1-213ENST00000524288 LYPD6Q86Y78 171 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 TMEM256Q8N2U0 113 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 C2orf73Q8N5S3 287 aaPredicted RBP3.55□□□□□ -1.84
SKP1-213ENST00000524288 OR4K13Q8NH42 304 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 OR5AK2Q8NH90 309 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 TNFAIP8L1Q8WVP5 186 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 TMEM234Q8WY98 164 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 FRZBQ92765 325 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 MAP1LC3CQ9BXW4 147 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 SEC11CQ9BY50 192 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 ARV1Q9H2C2 271 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 XKR8Q9H6D3 395 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 BIN3Q9NQY0 253 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 SIRT7Q9NRC8 400 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 C8orf17Q9NRJ1 99 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 NOSIPQ9Y314 301 aaKnown RBP3.55□□□□□ -1.84
SKP1-213ENST00000524288 KLF12Q9Y4X4 402 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 IER3IP1Q9Y5U9 82 aa3.55□□□□□ -1.84
SKP1-213ENST00000524288 DNAH12Q6ZR08 3092 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 IGKV1D-42A0A075B6H8 117 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 TVP23AA6NH52 213 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 ZNF860A6NHJ4 632 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 OR5H1A6NKK0 313 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 ZNF324O75467 553 aaPredicted RBP3.54□□□□□ -1.84
SKP1-213ENST00000524288 SIX6O95475 246 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 GPR75O95800 540 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 IGHMP01871 453 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 CD3DP04234 171 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 SLC35G6P0C7Q6 338 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 ZNF688P0C7X2 276 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 SPTBP11277 2137 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 GTF2F2P13984 249 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 ALOX5APP20292 161 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 CLDN12P56749 244 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 RAB38P57729 211 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 BTN3A2P78410 334 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 SIGLEC14Q08ET2 396 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 DHRS2Q13268 280 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 C6orf99Q4VX62 202 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 TRMT12Q53H54 448 aaKnown RBP3.54□□□□□ -1.84
SKP1-213ENST00000524288 TEX30Q5JUR7 227 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 Q5W150 140 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 HAGHLQ6PII5 290 aaPredicted RBP3.54□□□□□ -1.84
SKP1-213ENST00000524288 LYG2Q86SG7 212 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 UBALD2Q8IYN6 164 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 OR13C8Q8NGS7 320 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 OR6K6Q8NGW6 343 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 OR51A7Q8NH64 312 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 ASB17Q8WXJ9 295 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 ARL11Q969Q4 196 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 C12orf57Q99622 126 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 PRRT1Q99946 306 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 NMES1Q9C002 83 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 TMEM138Q9NPI0 162 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 FARSAQ9Y285 508 aaKnown RBP3.54□□□□□ -1.84
SKP1-213ENST00000524288 V9GYY9 64 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 PCNTO95613 3336 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 KIAA1549Q9HCM3 1950 aa3.54□□□□□ -1.84
SKP1-213ENST00000524288 FREM3P0C091 2139 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 THADAQ6YHU6 1953 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 OR5H14A6NHG9 310 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 DISC1C4P0D8 188 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 K7EN84 100 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 GPR31O00270 319 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TRAPPC6AO75865 159 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 IGKV1D-16P01601 117 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TRBV12-3P01733 135 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 HLA-DQA1P01909 254 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 APODP05090 189 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 CRHP06850 196 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 ASAH2BP0C7U1 165 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 LINC00869P0C866 280 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 PTHLHP12272 177 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TPT1P13693 172 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 PVALBP20472 110 aaPredicted RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 NPY1RP25929 384 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 CD34P28906 385 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 OPRK1P41145 380 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 GALR1P47211 349 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 RPL31P62899 125 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 UBE2IP63279 158 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 EIF3IQ13347 325 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 ELOCQ15369 112 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 MESTQ5EB52 335 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 RNASE13Q5GAN3 156 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 FAM74A1Q5RGS3 127 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 MDP1Q86V88 176 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 ANGPTL5Q86XS5 388 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms