RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 S100GP29377 79 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 MFAP2P55001 183 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 ACSM6Q6P461 480 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 NECAP1Q8NC96 275 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 ZNF486Q96H40 463 aaPredicted RBP13.67□□□□□ -0.22
CLK4-211ENST00000522556 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
CLK4-211ENST00000522556 HINT2Q9BX68 163 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 FAM212BQ9NTI7 297 aaPredicted RBP13.67□□□□□ -0.22
CLK4-211ENST00000522556 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
CLK4-211ENST00000522556 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 OR51B2Q9Y5P1 312 aa13.67□□□□□ -0.22
CLK4-211ENST00000522556 C3orf85A0A1B0GTC6 90 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 C15orf61A6NNL5 157 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 DISC1C4P0D8 188 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 SAP30O75446 220 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 HLA-AP01891 365 aaKnown RBP13.66□□□□□ -0.22
CLK4-211ENST00000522556 ECI1P42126 302 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 SYNJ2BPP57105 145 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 KLF9Q13886 244 aaPredicted RBP13.66□□□□□ -0.22
CLK4-211ENST00000522556 SLC25A42Q86VD7 318 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 OR1L8Q8NGR8 309 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 LHFPL5Q8TAF8 219 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 NDUFA4L2Q9NRX3 87 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 TMEM14BQ9NUH8 114 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 COPZ2Q9P299 210 aa13.66□□□□□ -0.22
CLK4-211ENST00000522556 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.65□□□□□ -0.22
CLK4-211ENST00000522556 SERPINE2P07093 398 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 OR5AC1P0C628 307 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 P0C879 139 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 TRAPPC2P0DI81 140 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 TRAPPC2BP0DI82 140 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 OR13C7P0DN81 318 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 EDN2P20800 178 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 KLF5Q13887 457 aaPredicted RBP13.65□□□□□ -0.22
CLK4-211ENST00000522556 SPINK9Q5DT21 86 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 ZFAND1Q8TCF1 268 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 TMEM230Q96A57 120 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 MCUBQ9NWR8 336 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 GPR132Q9UNW8 380 aa13.65□□□□□ -0.22
CLK4-211ENST00000522556 SNAPC5O75971 98 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 FGF2P09038 288 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 ZP3P21754 424 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 UCP1P25874 307 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 S100A5P33763 92 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 KLK9Q2XQG4 91 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 IL34Q6ZMJ4 242 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 H2BFWTQ7Z2G1 175 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 Q8N402 240 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 OR6Q1Q8NGQ2 317 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 SRRQ9GZT4 340 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 SLC2A8Q9NY64 477 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 KLK9Q9UKQ9 250 aa13.64□□□□□ -0.23
CLK4-211ENST00000522556 DEFA4P12838 97 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 CADM3Q8N126 398 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 GDPD1Q8N9F7 314 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 CCDC71LQ8N9Z2 235 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 PRRT1Q99946 306 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 NAA60Q9H7X0 242 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 ZC4H2Q9NQZ6 224 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 PRNDQ9UKY0 176 aa13.63□□□□□ -0.23
CLK4-211ENST00000522556 C14orf166Q9Y224 244 aaKnown RBP13.63□□□□□ -0.23
CLK4-211ENST00000522556 IGHV3-21A0A0B4J1V1 117 aa13.62□□□□□ -0.23
CLK4-211ENST00000522556 SPNP16150 400 aa13.62□□□□□ -0.23
CLK4-211ENST00000522556 AKR1C2P52895 323 aa13.62□□□□□ -0.23
CLK4-211ENST00000522556 RPEL1Q2QD12 228 aa13.62□□□□□ -0.23
CLK4-211ENST00000522556 TRIM16LQ309B1 348 aa13.62□□□□□ -0.23
CLK4-211ENST00000522556 GLYATL2Q8WU03 294 aa13.62□□□□□ -0.23
CLK4-211ENST00000522556 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
CLK4-211ENST00000522556 SDHCQ99643 169 aaPredicted RBP13.62□□□□□ -0.23
CLK4-211ENST00000522556 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
CLK4-211ENST00000522556 A0A0B4J293 547 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 CRYM-AS1A6NIL9 109 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 ETV6P41212 452 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 SURF2Q15527 256 aaPredicted RBP13.61□□□□□ -0.23
CLK4-211ENST00000522556 ADAMTSL5Q6ZMM2 481 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 Q6ZRM9 215 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 ZNF429Q86V71 674 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 OR9G4Q8NGQ1 327 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 OR5B3Q8NH48 314 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 OR4A16Q8NH70 328 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 TMEM222Q9H0R3 208 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
CLK4-211ENST00000522556 SELENOKQ9Y6D0 94 aa13.61□□□□□ -0.23
CLK4-211ENST00000522556 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
CLK4-211ENST00000522556 OR2C1O95371 312 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 LY86O95711 162 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 CSN3P07498 182 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 INSL3P51460 131 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 MECP2P51608 486 aaKnown RBP13.6□□□□□ -0.23
CLK4-211ENST00000522556 BAK1Q16611 211 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 DEFB121Q5J5C9 76 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
CLK4-211ENST00000522556 F11RQ9Y624 299 aaKnown RBP13.6□□□□□ -0.23
CLK4-211ENST00000522556 ST8SIA3O43173 380 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 DHFRP00374 187 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms