RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 PRR20AP86496 221 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 SSX2Q16385 188 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 FOXA2Q9Y261 457 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 A8MWP6 167 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 K7EM74 188 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 IGFBP2P18065 325 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 TIMP3P35625 211 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 SSTP61278 116 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 MLANAQ16655 118 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 STUMQ69YW2 141 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 SGMS2Q8NHU3 365 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 GAFA1Q96PS6 74 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 NPVFQ9HCQ7 196 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 A0A0U1RQK1 487 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 A0A1B0GV90 55 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 ZNF320A2RRD8 509 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 CXorf1O96002 111 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 OR4A8P0C604 315 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 GCHFRP30047 84 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 TEX38Q6PEX7 206 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 GBGT1Q8N5D6 347 aa6.92□□□□□ -1.3
CTNNA1-210ENST00000518825 ARFGEF3Q5TH69 2177 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 A0A087X0M5 115 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 A0A1B0GX30 115 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 MKRN2OSH3BPM6 223 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 ITGB1BP1O14713 200 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 CT45A6P0DMU7 189 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 CT45A5P0DMU8 189 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 CT45A7P0DMV0 189 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 GLRXP35754 106 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 KLF3P57682 345 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 FAM216BQ8N7L0 139 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 SLC24A4Q8NFF2 622 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 OR4S2Q8NH73 311 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 NEUROG1Q92886 237 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 F6UZH7 168 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 SLC17A3O00476 420 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 IGHV1-46P01743 117 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 NPY1RP25929 384 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 GATA4P43694 442 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 GNG10P50151 68 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 CNN1P51911 297 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 ERVK-16P61578 105 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 HSPE1P61604 102 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 RPL31P62899 125 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 TIMM23BQ5SRD1 257 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 MIR17HGQ75NE6 70 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 C1orf174Q8IYL3 243 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 DEFB108BQ8NET1 73 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 FAM216AQ8WUB2 273 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 IMMP2LQ96T52 175 aa6.91□□□□□ -1.3
CTNNA1-210ENST00000518825 SNRPCP09234 159 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 GATA2P23769 480 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 ADMP35318 185 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 LYG1Q8N1E2 194 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 CCL13Q99616 98 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 LINC00574Q9H8X3 128 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 SSUH2Q9Y2M2 353 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 YLPM1P49750 1951 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 E7EUB6 86 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 SFTPCP11686 197 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 RPL29P47914 159 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 MZT1Q08AG7 82 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 FAM27E3Q08E93 113 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 NCOR1P1Q9H4R4 102 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 TRAPPC1Q9Y5R8 145 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 CEP250Q9BV73 2442 aa6.9□□□□□ -1.3
CTNNA1-210ENST00000518825 CD33P20138 364 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 KIR2DS2P43631 304 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 MRPS11P82912 194 aaKnown RBP6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 POU2AF1Q16633 256 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 KCNIP4Q6PIL6 250 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 OR4P4Q8NGL7 312 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 C11orf52Q96A22 123 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 SLC45A2Q9UMX9 530 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 OR51B2Q9Y5P1 312 aa6.9□□□□□ -1.31
CTNNA1-210ENST00000518825 DYSFO75923 2080 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 GRIFINA4D1Z8 144 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 OR5I1Q13606 314 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 PPP1R35Q8TAP8 253 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 MISP3Q96FF7 219 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 ROS1P08922 2347 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 F2Z2F3 143 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 ACTL6BO94805 426 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 GCGP01275 180 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 CCKARP32238 428 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 RAB7AP51149 207 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 MORN5Q5VZ52 161 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 SLC25A48Q6ZT89 311 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 ZCCHC24Q8N2G6 241 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 LRBAP50851 2863 aa6.89□□□□□ -1.31
CTNNA1-210ENST00000518825 TEX50A0A1B0GTY4 177 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms