RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 LINC00471Q8N535 108 aa0.69□□□□□ -2.3
SMARCA5-203ENST00000515531 TMEM161BQ8NDZ6 487 aa0.69□□□□□ -2.3
SMARCA5-203ENST00000515531 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
SMARCA5-203ENST00000515531 TECTAO75443 2155 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 FGF6P10767 208 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 KCNE1P15382 129 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 PSMB6P28072 239 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 SUPT4H1P63272 117 aaKnown RBP0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 UBE2IP63279 158 aaKnown RBP0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 DMTNQ08495 405 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 ZNF846Q147U1 533 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 WFDC11Q8NEX6 87 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 C11orf40Q8WZ69 217 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 FAM96AQ9H5X1 160 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 IL36BQ9NZH7 164 aa0.68□□□□□ -2.3
SMARCA5-203ENST00000515531 CACNA1BQ00975 2339 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 DIDO1Q9BTC0 2240 aaKnown RBP0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 C1orf232A0A0U1RR37 186 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 YEATS4O95619 227 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 RPS4Y1P22090 263 aaKnown RBP0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 CAV1Q03135 178 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 RSU1Q15404 277 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 CLEC6AQ6EIG7 209 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 PLEKHG7Q6ZR37 379 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 COMMD7Q86VX2 200 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 STRCQ7RTU9 1775 aa0.67□□□□□ -2.3
SMARCA5-203ENST00000515531 FABP5P3A8MUU1 101 aa0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 CALUO43852 315 aaPredicted RBP0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 OR5F1O95221 314 aa0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 TYMSP04818 313 aa0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 CD151P48509 253 aa0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 ZNF80P51504 273 aaPredicted RBP0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 GLT8D1Q68CQ7 371 aa0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 DIRAS2Q96HU8 199 aa0.66□□□□□ -2.3
SMARCA5-203ENST00000515531 PFDN6O15212 129 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 BRS3P32247 399 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 MAP2K4P45985 399 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 UBE2G2P60604 165 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 GPR32P1Q8NGA4 272 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 TMEM106AQ96A25 262 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 CMTM5Q96DZ9 223 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 OBSCN-AS1Q96MR7 158 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 HDHD2Q9H0R4 259 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 MAP1LC3AQ9H492 121 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 PLEKHJ1Q9NW61 149 aa0.65□□□□□ -2.31
SMARCA5-203ENST00000515531 GOLGA8KD6RF30 607 aa0.64□□□□□ -2.31
SMARCA5-203ENST00000515531 KRT7P08729 469 aa0.64□□□□□ -2.31
SMARCA5-203ENST00000515531 SYPL2Q5VXT5 272 aa0.64□□□□□ -2.31
SMARCA5-203ENST00000515531 LCN15Q6UWW0 184 aa0.64□□□□□ -2.31
SMARCA5-203ENST00000515531 LINC00526Q96FQ7 95 aa0.64□□□□□ -2.31
SMARCA5-203ENST00000515531 EFCAB1Q9HAE3 211 aa0.64□□□□□ -2.31
SMARCA5-203ENST00000515531 FAM25EA8MYX2 175 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 CLPSP04118 112 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 PRM2P04554 102 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 FAM228BP0C875 321 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 RPL12P30050 165 aaKnown RBP0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 STX5Q13190 355 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 IBA57Q5T440 356 aaKnown RBP0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 ZNF550Q7Z398 422 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 UPF3BQ9BZI7 483 aaKnown RBP0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 KLK9Q9UKQ9 250 aa0.63□□□□□ -2.31
SMARCA5-203ENST00000515531 ZNF469Q96JG9 3925 aaPredicted RBP0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 LOC110117498A0A087WWA1 95 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 COCHO43405 550 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 FADS1O60427 444 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 APOEP02649 317 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 MAP3K7CLP57077 242 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 SKP1P63208 163 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 COQ5Q5HYK3 327 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 C1orf158Q8N1D5 194 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 OR4D11Q8NGI4 311 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 MCFD2Q8NI22 146 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 IMP3Q9NV31 184 aaKnown RBP0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 CKLFQ9UBR5 152 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 ZFP30Q9Y2G7 519 aa0.62□□□□□ -2.31
SMARCA5-203ENST00000515531 TNRC6BQ9UPQ9 1833 aaKnown RBP0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 UCHL3P15374 230 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 MYL12AP19105 171 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 ZNF93P35789 620 aaPredicted RBP0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 ZNF826PQ6ZT77 177 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 RASSF5Q8WWW0 418 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 ATP6V1G3Q96LB4 118 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 CNBD2Q96M20 576 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 SLC50A1Q9BRV3 221 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 C3orf18Q9UK00 162 aa0.61□□□□□ -2.31
SMARCA5-203ENST00000515531 MAST2Q6P0Q8 1798 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 HYPMO75409 117 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 C8orf88P0DMB2 117 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 BLVRAP53004 296 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 IFITM2Q01629 132 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 MED21Q13503 144 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 GRK1Q15835 563 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 C1orf195Q5TG92 126 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 PHF13Q86YI8 300 aaPredicted RBP0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 FAM9CQ8IZT9 166 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 DEFB125Q8N687 156 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 ANAPC1Q9H1A4 1944 aa0.6□□□□□ -2.31
SMARCA5-203ENST00000515531 LAMA4Q16363 1823 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 ABCC11Q96J66 1382 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms