RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZNF324O75467 553 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-213ENST00000514442 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 EFNA2O43921 213 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
TCOF1-213ENST00000514442 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
TCOF1-213ENST00000514442 HGFACQ04756 655 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 FOXL1Q12952 345 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 AMMECR1LQ6DCA0 310 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 SAXO1Q8IYX7 474 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 GCSAMQ8N6F7 178 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 SPSB4Q96A44 273 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 PLSCR2Q9NRY7 297 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 IGKV1D-8A0A087WSZ0 117 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 CORTO00230 105 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 CD55P08174 381 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 ATP5G3P48201 142 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 PDPNQ86YL7 162 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 OR8A1Q8NGG7 326 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 DENND4AQ7Z401 1863 aa11.07□□□□□ -0.64
TCOF1-213ENST00000514442 QRFPP83859 136 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 ID3Q02535 119 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 C1RLQ9NZP8 487 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 CEACAM18A8MTB9 384 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
TCOF1-213ENST00000514442 KLRB1Q12918 225 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 NPCDR1Q9BY65 106 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 P01737 135 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 CLPSP04118 112 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 IGHV1-69-2A0A0G2JMI3 117 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 VKORC1L1Q8N0U8 176 aa11.06□□□□□ -0.64
TCOF1-213ENST00000514442 CD33P20138 364 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 MDC1Q14676 2089 aaKnown RBP11.05□□□□□ -0.64
TCOF1-213ENST00000514442 ARF6P62330 175 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 LYRM7Q5U5X0 104 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 FAM131CQ96AQ9 280 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 CHODLQ9H9P2 273 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 IDI2-AS1Q9NZ38 188 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 FHL1Q13642 323 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 TIMM23BQ5SRD1 257 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 RTN4RL2Q86UN3 420 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 PSG1P11464 419 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 TSPOP30536 169 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 C10orf113Q5VZT2 155 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 JKAMPQ9P055 326 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 NLRC5Q86WI3 1866 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 SCO2A0A1W2PP80 73 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 NMUP48645 174 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 DOLPP1Q86YN1 238 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
TCOF1-213ENST00000514442 J3KRW8 73 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 ZNF137PP52743 207 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 RELBQ01201 579 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 MUC15Q8N387 334 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 FAM216AQ8WUB2 273 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 GATAD1Q8WUU5 269 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 C1QTNF5Q9BXJ0 243 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 SPRR3Q9UBC9 169 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 RAXQ9Y2V3 346 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
TCOF1-213ENST00000514442 IGLV3-32A0A0A0MS00 114 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 KIR2DL5BA0A0G2JN68 375 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 KIR2DL5BA0A0G2JPC4 375 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 PSG7Q13046 419 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 KIR2DL5AQ8N109 375 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 FAM222BQ8WU58 562 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 ZNF319Q9P2F9 582 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 IGHV2OR16-5A0A0B4J2B6 119 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 CENPWQ5EE01 88 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 CLEC2AQ6UVW9 174 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 GP6Q9HCN6 339 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 SPCS1Q9Y6A9 102 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 CD40P25942 277 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 FGFBP3Q8TAT2 258 aa11.04□□□□□ -0.64
TCOF1-213ENST00000514442 ZG16O60844 167 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 GPR183P32249 361 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 FOXG1P55316 489 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-213ENST00000514442 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 LYZL4Q96KX0 146 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 ELOVL5Q9NYP7 299 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 SLC25A17O43808 307 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 RPL27AP46776 148 aaKnown RBP11.03□□□□□ -0.64
TCOF1-213ENST00000514442 BSPH1Q075Z2 132 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 TFF3Q07654 80 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 Q0VFX4 171 aa11.03□□□□□ -0.64
TCOF1-213ENST00000514442 FNDC4Q9H6D8 234 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms