RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CCDC71LQ8N9Z2 235 aa10.74□□□□□ -0.69
DDX41-212ENST00000511040 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
DDX41-212ENST00000511040 OR1L8Q8NGR8 309 aa10.74□□□□□ -0.69
DDX41-212ENST00000511040 SEC22AQ96IW7 307 aa10.74□□□□□ -0.69
DDX41-212ENST00000511040 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
DDX41-212ENST00000511040 RTBDNQ9BSG5 229 aaPredicted RBP10.74□□□□□ -0.69
DDX41-212ENST00000511040 RANGRFQ9HD47 186 aaPredicted RBP10.74□□□□□ -0.69
DDX41-212ENST00000511040 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
DDX41-212ENST00000511040 PEF1Q9UBV8 284 aaKnown RBP10.74□□□□□ -0.69
DDX41-212ENST00000511040 C14orf166Q9Y224 244 aaKnown RBP10.74□□□□□ -0.69
DDX41-212ENST00000511040 PRKDCP78527 4128 aaKnown RBP10.73□□□□□ -0.69
DDX41-212ENST00000511040 K7EIL1 84 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 TRAPPC2P0DI81 140 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 TRAPPC2BP0DI82 140 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 CTRB1P17538 263 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.69
DDX41-212ENST00000511040 ECI1P42126 302 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 TRIM16LQ309B1 348 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 CTRB2Q6GPI1 263 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 Q8N402 240 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 PRRT1Q99946 306 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 C5orf66Q9H5L9 145 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 PRNDQ9UKY0 176 aa10.73□□□□□ -0.69
DDX41-212ENST00000511040 TEX13DA0A0J9YY54 714 aaPredicted RBP10.72□□□□□ -0.69
DDX41-212ENST00000511040 SAP30O75446 220 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 IGKV1-5P01602 117 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 OR13C7P0DN81 318 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 ZP3P21754 424 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 MECP2P51608 486 aaKnown RBP10.72□□□□□ -0.69
DDX41-212ENST00000511040 SYNJ2BPP57105 145 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 WT1-ASQ06250 92 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 KLF9Q13886 244 aaPredicted RBP10.72□□□□□ -0.69
DDX41-212ENST00000511040 OR6Q1Q8NGQ2 317 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 OR4A16Q8NH70 328 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
DDX41-212ENST00000511040 IGLV11-55A0A075B6I3 123 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.71□□□□□ -0.69
DDX41-212ENST00000511040 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 PPP5D1E7EU14 171 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 DHFRP00374 187 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 FGF2P09038 288 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 OR5AC1P0C628 307 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 AKR1C2P52895 323 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 SPANXN2Q5MJ10 180 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 HAPLN4Q86UW8 402 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 CADM3Q8N126 398 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 PRR25Q96S07 402 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 SRSF8Q9BRL6 282 aaKnown RBP10.71□□□□□ -0.69
DDX41-212ENST00000511040 NAA60Q9H7X0 242 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 TMEM14BQ9NUH8 114 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 SCP2D1Q9UJQ7 156 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 GPR132Q9UNW8 380 aa10.71□□□□□ -0.69
DDX41-212ENST00000511040 MFSD2BA6NFX1 497 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 BMPR1BO00238 502 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 HLA-AP01891 365 aaKnown RBP10.7□□□□□ -0.7
DDX41-212ENST00000511040 HIST1H1BP16401 226 aaKnown RBP10.7□□□□□ -0.7
DDX41-212ENST00000511040 UCP1P25874 307 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
DDX41-212ENST00000511040 SURF2Q15527 256 aaPredicted RBP10.7□□□□□ -0.7
DDX41-212ENST00000511040 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 SPINK9Q5DT21 86 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 DEFB121Q5J5C9 76 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 ACSM6Q6P461 480 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 CLEC19AQ6UXS0 136 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 TOMM5Q8N4H5 51 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 RNASE11Q8TAA1 199 aaKnown RBP10.7□□□□□ -0.7
DDX41-212ENST00000511040 LSM10Q969L4 123 aaKnown RBP10.7□□□□□ -0.7
DDX41-212ENST00000511040 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 TSC22D3Q99576 134 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 SRRQ9GZT4 340 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 FKBP11Q9NYL4 201 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 PRR13Q9NZ81 148 aa10.7□□□□□ -0.7
DDX41-212ENST00000511040 A0A0G2JRQ6 117 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 CRYM-AS1A6NIL9 109 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 LY86O95711 162 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 P0C879 139 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 ETV6P41212 452 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 MFAP2P55001 183 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 AP3S2P59780 193 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 ZNF57Q68EA5 555 aaPredicted RBP10.69□□□□□ -0.7
DDX41-212ENST00000511040 THOC7Q6I9Y2 204 aaKnown RBP10.69□□□□□ -0.7
DDX41-212ENST00000511040 SLC25A24Q6NUK1 477 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 ZNF429Q86V71 674 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 GDPD1Q8N9F7 314 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 OR5B3Q8NH48 314 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 LHFPL5Q8TAF8 219 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 TMEM230Q96A57 120 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 EEF1AKMT3Q96AZ1 226 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 OR4C12Q96R67 309 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 ELOVL1Q9BW60 279 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 TMEM222Q9H0R3 208 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 ZC4H2Q9NQZ6 224 aa10.69□□□□□ -0.7
DDX41-212ENST00000511040 IGHV3-21A0A0B4J1V1 117 aa10.68□□□□□ -0.7
DDX41-212ENST00000511040 A0A0B4J293 547 aa10.68□□□□□ -0.7
DDX41-212ENST00000511040 OR2C1O95371 312 aa10.68□□□□□ -0.7
DDX41-212ENST00000511040 AKR1C4P17516 323 aa10.68□□□□□ -0.7
DDX41-212ENST00000511040 FAUP35544 74 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms