RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 TNFSF12O43508 249 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ANGPTL7O43827 346 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 CD8AP01732 235 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 HLA-DRB1P01911 266 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ZNF728P0DKX0 622 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 IFITM1P13164 125 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 RPL35AP18077 110 aaKnown RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 GADD45AP24522 165 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 TSPOP30536 169 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ARL2P36404 184 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 CA7P43166 264 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 KIR2DS2P43631 304 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 FOXA1P55317 472 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 RPS23P62266 143 aaKnown RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 RPS4XP62701 263 aaKnown RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 ZNF92Q03936 586 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 MEF2CQ06413 473 aaPredicted RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 HES1Q14469 280 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 DUSP5Q16690 384 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 TSPO2Q5TGU0 170 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 DMKNQ6E0U4 476 aaPredicted RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 CLEC20AQ6ZU45 233 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 H2AFVQ71UI9 128 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ZNF433Q8N7K0 673 aaPredicted RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ZNF615Q8N8J6 731 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 PRELID2Q8N945 189 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ZFP62Q8NB50 900 aaPredicted RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 OR8B12Q8NGG6 310 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 OR2AJ1Q8NGZ0 328 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 C8orf46Q8TAG6 207 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 RASL10AQ92737 203 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 ARPC1AQ92747 370 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 BMFQ96LC9 184 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 S1PR3Q99500 378 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 HSD17B10Q99714 261 aaKnown RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 PDCD1LG2Q9BQ51 273 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 SOSTQ9BQB4 213 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 PRRG4Q9BZD6 226 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 TCEAL2Q9H3H9 227 aaPredicted RBP4.1□□□□□ -1.75
NUP54-210ENST00000510884 PARP11Q9NR21 331 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 SCML2Q9UQR0 700 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 FUT9Q9Y231 359 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 NTNG1Q9Y2I2 539 aa4.1□□□□□ -1.75
NUP54-210ENST00000510884 TRAV19A0A0A6YYK7 116 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR4C45A6NMZ5 311 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 GGTLC3B5MD39 225 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 F5H5P2 479 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 TMEM250H0YL14 139 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 XKRYO14609 159 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 TAX1BP3O14907 124 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 CLDN11O75508 207 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 SFT2D2O95562 160 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 GYPAP02724 150 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 ATP5G1P05496 136 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 IGLC2P0DOY2 106 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 IGLC3P0DOY3 106 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 SLC25A4P12235 298 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 BCKDHAP12694 445 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 CXCL3P19876 107 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 ATP5G3P48201 142 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 SSR4P51571 173 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 RND2P52198 227 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 NDUFV3P56181 108 aaKnown RBP4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR1D5P58170 312 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 ATP5G2Q06055 141 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 PNOCQ13519 176 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 TTC32Q5I0X7 151 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 PAGE3Q5JUK9 113 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 SLC25A30Q5SVS4 291 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 FAM27D1Q5T7N8 215 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 AMMECR1LQ6DCA0 310 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR2T5Q6IEZ7 315 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 SLC25A47Q6Q0C1 308 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 SSX8Q7RTT4 187 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 MRPL55Q7Z7F7 128 aaKnown RBP4.09□□□□□ -1.75
NUP54-210ENST00000510884 ZNF429Q86V71 674 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR2T29Q8NH02 315 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR52N5Q8NH56 324 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 IP6K3Q96PC2 410 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 GPR21Q99679 349 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 TSSK6Q9BXA6 273 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 ST20Q9HBF5 79 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 CA10Q9NS85 328 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 TMEM106BQ9NUM4 274 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 RBM22Q9NW64 420 aaKnown RBP eCLIP4.09□□□□□ -1.75
NUP54-210ENST00000510884 ZNF226Q9NYT6 803 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 OR5V1Q9UGF6 321 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 AK3Q9UIJ7 227 aa4.09□□□□□ -1.75
NUP54-210ENST00000510884 PKD1L3Q7Z443 1732 aa4.09□□□□□ -1.76
NUP54-210ENST00000510884 ARAP2Q8WZ64 1704 aa4.09□□□□□ -1.76
NUP54-210ENST00000510884 PARP4Q9UKK3 1724 aaKnown RBP4.09□□□□□ -1.76
NUP54-210ENST00000510884 LAMB1P07942 1786 aa4.09□□□□□ -1.76
NUP54-210ENST00000510884 LOXHD1Q8IVV2 1947 aa4.09□□□□□ -1.76
NUP54-210ENST00000510884 REV3LO60673 3130 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 FXYD6-FXYD2A0A087WZ82 144 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms