RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 GAB4Q2WGN9 574 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 FAM69BQ5VUD6 431 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 ZNF645Q8N7E2 425 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 DEPPQ9NTK1 212 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 SERTAD4Q9NUC0 356 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 TRBV6-6A0A0A6YYG2 114 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 OR9G9P0C7N8 305 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 P0C879 139 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 TMEM92Q6UXU6 159 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 TSTD1Q8NFU3 115 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 TSACCQ96A04 125 aaPredicted RBP8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 NABP1Q96AH0 204 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 HILPDAQ9Y5L2 63 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 GON4LQ3T8J9 2241 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 XIRP2A4UGR9 3374 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 NPIPB11E5RHQ5 1161 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 RBMXL2O75526 392 aaKnown RBP8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 FGF6P10767 208 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 CRYGSP22914 178 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 MFAP2P55001 183 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 PRSS12P56730 875 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 AESQ08117 197 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 C10orf128Q5T292 105 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 WDR74Q6RFH5 385 aaPredicted RBP8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 LRRC29Q8WV35 223 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 DPF1Q92782 380 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 ZDHHC16Q969W1 377 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 RAB37Q96AX2 223 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 RABAC1Q9UI14 185 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 JPT1Q9UK76 154 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 EFNA2O43921 213 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 IGLV2-8P01709 118 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 LIPFP07098 398 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 BCL3P20749 454 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 FGF12P61328 243 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 CCL7P80098 99 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 C17orf67Q0P5P2 114 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 PDLIM3Q53GG5 364 aaPredicted RBP8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 TIMM23BQ5SRD1 257 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 SPATA46Q5T0L3 261 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 SAMD5Q5TGI4 173 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 LYSMD4Q5XG99 296 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 SFTPA2Q8IWL1 248 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 SPEM1Q8N4L4 309 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 ZNF441Q8N8Z8 693 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 OR4A16Q8NH70 328 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 ZNF418Q8TF45 676 aaPredicted RBP8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 PATE1Q8WXA2 126 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 MS4A5Q9H3V2 200 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 RP1P56715 2156 aa8.31□□□□□ -1.08
PDGFRA-207ENST00000509092 PRUNE2Q8WUY3 3088 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 A0A1W2PRE2 83 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 HSPB6O14558 160 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 SNAI2O43623 268 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 CELA3AP09093 270 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 CYB561P49447 251 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 PARM1Q6UWI2 310 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 SSX8Q7RTT4 187 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 NEU4Q8WWR8 484 aaPredicted RBP8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 RLN3Q8WXF3 142 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 TRIB1Q96RU8 372 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 OR1A1Q9P1Q5 309 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 HSPB8Q9UJY1 196 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 TRAPPC2LQ9UL33 140 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 IGKV3D-11A0A0A0MRZ8 115 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 C15orf62A8K5M9 175 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 LAMTOR5O43504 91 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 P04436 131 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 CEACAM16Q2WEN9 425 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 TMEM177Q53S58 311 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 WIPI1Q5MNZ9 446 aaPredicted RBP8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 MIC13Q5XKP0 118 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 DHRS13Q6UX07 377 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 STPG3Q8N7X2 389 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 PIGCQ92535 297 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 GGTLC1Q9BX51 225 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 ZNF576Q9H609 170 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 SS18L2Q9UHA2 77 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 PSG8Q9UQ74 426 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 LRP4O75096 1905 aa8.3□□□□□ -1.08
PDGFRA-207ENST00000509092 SPTBN5Q9NRC6 3674 aaKnown RBP8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 hCG_38984A0A1B0GV85 526 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 CA1P00915 261 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 C2orf27AQ580R0 203 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 GCSAMQ8N6F7 178 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 OR9G4Q8NGQ1 327 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 MGST2Q99735 147 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 FAM110AQ9BQ89 295 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 SIGLEC8Q9NYZ4 499 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 DIDO1Q9BTC0 2240 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms